Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq906 257 1e-63
seq1133 96.9 3e-15
>seq906
Length=144635
Score = 257 bits (284), Expect = 1e-63
Identities = 481/700 (69%), Gaps = 10/700 (1%)
Strand=Plus/Plus
Query 23063 GTGTACTCTACAATTTCGGTACATAGATTG---CTACACTTTATCGTGCCCAAATTGCTC 23119
|||||||| || |||||| || || ||| |||| || ||||| | || ||
Sbjct 62869 GTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGA---ATGGTGCCAAGGTTCTTC 62925
Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179
|||||||| || || ||||| |||||||| | |||| | || | || || ||||||
Sbjct 62926 TGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACC 62985
Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CC 23238
|| | ||||| |||||| ||| | ||||||| | ||| ||| | || | | ||
Sbjct 62986 TGGGCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGGACA-GTCTCGCGACCACGACC 63044
Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298
|| | ||| |||| | ||| | || || ||||| |||| || |||||| || ||
Sbjct 63045 CTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACC 63104
Query 23299 GGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAA 23358
|| | | | || |||||||| |||| | || | ||||| || |||| ||
Sbjct 63105 AGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAA 63164
Query 23359 AAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGT 23418
||||| || ||||| ||||||||||| || || || ||||| ||||||||||| |||
Sbjct 63165 GAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTG 63224
Query 23419 GTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGC 23478
|||||| | || | |||| || || || |||||||||||||||||||| | |||
Sbjct 63225 GTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGC 63284
Query 23479 AAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACAC 23538
|| || || || | ||| || || ||||| || ||||| ||||| ||||||||||||||
Sbjct 63285 GAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACAC 63344
Query 23539 TCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG-AACCTT 23597
| ||||| || | ||| |||||| | |||| || ||| || | | ||
Sbjct 63345 ACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCG-TTAGTACCGGCAATGTAGCTGCCAG 63403
Query 23598 TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGC 23657
| || || | | |||||||| | ||| || || ||| | | || || ||||| || |
Sbjct 63404 TGGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCAC 63463
Query 23658 ATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAAC 23717
| ||||| ||||||||||| ||||| ||||| ||||| || | ||| | ||| |
Sbjct 63464 AGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGC 63523
Query 23718 ACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757
| |||| || || | ||||| ||| | || ||||||
Sbjct 63524 AAGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAG 63563
>seq1133
Length=54950
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/208 (71%), Gaps = 6/208 (3%)
Strand=Plus/Plus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| |||| || || |||| |||| |||| | ||||| |
Sbjct 54463 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACGTCAA---G 54519
Query 31277 AG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGC 31333
|| || | | ||||||||||||| | || || || |||||||| || || |||||||||
Sbjct 54520 AGCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAGCAGCGCCTCATCTTCGCTGGC 54579
Query 31334 AAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTT 31393
|| ||| | || || ||| | ||||| || ||||| || || || ||||| |||
Sbjct 54580 AAGCAGCTTGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAGGAGTCGACCCTT 54639
Query 31394 CATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || | ||| | || ||||
Sbjct 54640 CACCTCGTCCTCCGCCTGCGTGGTGGTA 54667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445741269919200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |