Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq906 102 1e-16 >seq906 Length=144635 Score = 102 bits (112), Expect = 1e-16 Identities = 267/402 (66%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 80354 TAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATT 80413 |||| ||||||||||| || | || |||| |||||||| |||||||| || | Sbjct 63620 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 63679 Query 80414 CTATATC-CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 | || || || | ||||| || || || |||||||| | ||| ||||| || || || Sbjct 63680 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 63738 Query 80473 ACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAG 80532 | | ||| | || | | ||| || | || | ||| || ||||| || || Sbjct 63739 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 63798 Query 80533 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 80592 | ||| ||||| || || || | ||| | |||||||| | || | ||||| Sbjct 63799 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 63858 Query 80593 ACTACATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAAC 80651 || | || | || | ||| || || || ||||| ||||||| ||||| || || || Sbjct 63859 ACAATTTCGAATGT-CTCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 63917 Query 80652 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT 80711 ||||||| | | ||| | || || | |||| | || || || | |||||| || || Sbjct 63918 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 63977 Query 80712 TGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || ||||| || | ||| || | |||||| || || ||||| Sbjct 63978 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 64019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718228307596400