Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq4397 111 2e-19
>seq4397
Length=39634
Score = 111 bits (122), Expect = 2e-19
Identities = 164/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691
|| || ||||| ||||| || ||||| ||||||||||| | ||||| || | | |||
Sbjct 29543 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGC 29602
Query 50692 ATGAACGCAGAC-ATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50750
|||||||| ||| | |||||| ||||||| ||||| ||||| ||| | || || ||
Sbjct 29603 ATGAACGC-GACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGC 29661
Query 50751 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50809
|||||| |||| ||| ||||| || | |||||||| || ||| | ||||| |
Sbjct 29662 GCTGGG-CAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCT 29720
Query 50810 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856
|| | | ||||| || ||||| ||||| | || || || || |||
Sbjct 29721 CGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTAC 29767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506985817063200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |