Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1133 131 3e-25
seq4286 104 4e-17
seq1679 98.7 2e-15
seq3677 86.0 1e-11
>seq1133
Length=54950
Score = 131 bits (144), Expect = 3e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || || ||||| || |||||||| || ||| |
Sbjct 54665 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTG 54606
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| ||||| | || || || || |||
Sbjct 54605 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGA 54546
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| ||||||| ||||||||||| | || || ||
Sbjct 54545 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACC 54486
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 54485 TCGAGGGTGATGGTCTTGCCGGTGA 54461
Score = 122 bits (134), Expect = 2e-22
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | ||| || ||| ||| || |||||||| || |||||
Sbjct 54948 CCGCCGCGGAGACGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 54889
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || ||||| || |||
Sbjct 54888 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 54829
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||| ||||||| ||||||||||| ||| || || ||
Sbjct 54828 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTC-GCTCGACTCGAC 54770
Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 54769 CTCGAGGGTGATGGTCTTGCCAGT 54746
>seq4286
Length=94709
Score = 104 bits (114), Expect = 4e-17
Identities = 666/1043 (64%), Gaps = 54/1043 (5%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | |||||| ||||| ||||| || || ||| ||| ||
Sbjct 91439 CGCCACTGGATGTACTCGGAGGGGGTAGAGTCCAAGTGGTGGTCGATGTGGGCGAAGGCG 91380
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100
||||| | ||| || || || ||||| || | | || ||| ||| ||
Sbjct 91379 TGCTGCTTGATGTAGGCAATACGGATGTTCTCGTGGTGGTAGACCTCACCCGAAGTGGGG 91320
Query 225101 -TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| || || || || ||||| |||| ||| |||| |||||| ||||| |||||||||||
Sbjct 91319 ATGAGC-TCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCAGCACCGTTGGGGCCAAT 91261
Query 225160 CACGCCAATCCGGGATGACATTGCAAC-CTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218
||| |||| ||||| | || | | ||| || | | || | |||||| ||||
Sbjct 91260 GACGGCAATACGGGA-GCCAAGAGAGCACTGGAAGGTGATGTCGG---AGATCTG-GGGC 91206
Query 225219 C---AGTTT----GGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271
|| | |||| |||| || | | | | ||||| | |||||
Sbjct 91205 TTGGAGGTACCGGGGTACTGGAAGGTCATGTTGCTGACACGGACAATGGCCTTGGCCTTG 91146
Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTC 225331
| | | |||||| ||||| |||||||||||||||| ||| || | | | |
Sbjct 91145 GTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAACTTGAACTCCATCTCGGAGGCACCG 91086
Query 225332 AGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGG 225391
|| ||||||||||| || || ||| ||||| | || | ||| || ||
Sbjct 91085 AGCTCGTAGTAAGACTTGGCGGAAGGAACCTTCTTGACGAACTCGGAGATGTTACCACGG 91026
Query 225392 TGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC-GTCAA 225449
| | ||||||||| | || |||| || | || ||| | | || ||| |
Sbjct 91025 TAACGCTTGAGCTTGAAGCGCT---CGTAGTGGATAACGTGCTGG--ATGGTGTTGTCCA 90971
Query 225450 GGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAG--GCCCTTGAGGT 225506
||| ||||||||||| | |||||||| | || | | || | | |||||
Sbjct 90970 AGAACTTGGAGTCGTGGGAGATGATGATGGAGGTGCAAG---GAGAGTTGAC---GAGGT 90917
Query 225507 GCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565
| || | |||||| || ||||| |||||||||||||||| || || ||||| || ||
Sbjct 90916 AC-TGCTCGAGCCAAGCAACGTTCTTGACGTCCATGTGGTTGGTGGGCTCGTCGAGCAGA 90858
Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625
|| || || | || || || ||| || | |||| ||||||||| ||||| || ||
Sbjct 90857 AGAATATCGGGCTCCTCGAAGACGGCACGGGCAAGAGCCAGCTTCATCTTCCAACCACCA 90798
Query 225626 GACAGGGAGCCGATTGAAACAGAGTGCTTAGCTT-CGT-CAAAGCCGTACTCCAGGAGCG 225683
|| || ||| ||| | | | | || ||| || | || ||| ||||| ||||
Sbjct 90797 GAGAGCGAGGTGATGGGAGCCTCGAACT--GCTCGCGAACGAAACCGAACTCCTCGAGCT 90740
Query 225684 T---CTGGATAA-----TGCG-CTCGG-GAGAGCTGCGAGCGGCAACGTTGGGGTCGGAC 225733
| ||||| | || | || || || | | || ||| ||| || || |
Sbjct 90739 TGTTCTGGACATCCTCCTGGGTCTTGGTGACACCAGC-AGCCTCAAGCTTCTTCATGGTC 90681
Query 225734 GAGAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTAC 225793
|| ||| | ||||| || | | | | | ||| | |||||| || |||||
Sbjct 90680 CAGCC--AATGA----CGGTCTGCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACGTAG 90627
Query 225794 ACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGG 225853
|| ||| || || || | |||||| ||||| ||||| | || || |||||
Sbjct 90626 ACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAGCTGCTCGTTGTTGATGGCACGC 90567
Query 225854 AGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTG 225913
| ||||| |||| || | |||||||| || | || ||||| | | || |||||
Sbjct 90566 ATGAGGGTGGTCTTACCGGAACCGTTGGGGCCCAGAAGACCGTAGCGGTGGCCACGCTTC 90507
Query 225914 ATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAA 225973
| ||| | || ||| || || |||||| |||| ||||| |||||||| |||
Sbjct 90506 AGACGCAGGTGAGTCTGGTTGAGCAGAATCTTGGCACCGTAGGCCAGGGAGAAAGTGCAG 90447
Query 225974 TCGCACAGGTCCTCACCCTCCTC 225996
| |||||| ||||||||||||||
Sbjct 90446 TTGCACAGATCCTCACCCTCCTC 90424
>seq1679
Length=130797
Score = 98.7 bits (108), Expect = 2e-15
Identities = 282/431 (65%), Gaps = 2/431 (0%)
Strand=Plus/Minus
Query 59091 AGTAGAGCATGCCGGACAGGAAGCAGGCCTTTTGGCGGAAGCTCAGATTGGACTTCCAGA 59150
|||| | |||||| |||| | || | || ||| ||| || ||||| ||||||
Sbjct 95691 AGTACATCATGCCCGACAAATAACATACTTTCTGGATGAAAGAGAGCTTGGATCTCCAGA 95632
Query 59151 AGTGGGGGTTGGTGCACAGAGTCGTGGAACCCAGCGCCCAACGGTATTGCTGGCTGAAGA 59210
| | || || ||| |||||| |||||||||| ||| || ||||||| ||| |
Sbjct 95631 ACTCTGGATTTGTGAGCAGAGTTGTGGAACCCATGCACCAGCGCATTTGCTGGGAGAAAA 95572
Query 59211 ACGACTTGAGCTCGTAGGGGCAAACTCCCTTGGCAAGGTTCAGGGGAATGTACTTGAGCT 59270
||| | | | || ||||| || || ||||| ||| |||| ||||| || |
Sbjct 95571 ACGCGCGGGGATTGTCAGGGCAGACGCCGGCAGCAAGACACAGAGGAACGTACTCGACCG 95512
Query 59271 TCCAGCCGTCGTCAACTACTGCAAAGCCCGTGTGGACGTCCTCGCTGAAGCCAATCTCAG 59330
|||| || |||||| | |||| || |||||||| || ||| | || ||||| |
Sbjct 95511 TCCACCCACGGTCAACAGCCCCAAAACCAGTGTGGACATCTTCGGAATATCCGATCTCTG 95452
Query 59331 CAGTGCCGCCGAAAGGTACAAGCGCCTCTCGGCGGTAGACTGCGCATGTCCCGACGCACA 59390
|||||||||| | | || || || || ||||| || || | || ||||| |
Sbjct 95451 CAGTGCCGCCCACCTCAGCCAGAGCTTCACGACGGTACACGGCATTGCTGCCCACGCAGA 95392
Query 59391 CGGCGCCGCCAAAGGTGTCGCGAGAAACCTGGATGAAACGGTAGAACAGTTCCTGGACGG 59450
| | | || || || ||| ||||| | | |||||||| || || || ||
Sbjct 95391 TCGAGGCCCCCCAGCGGTTGCGGTTGACCTGAACAACGCGGTAGAAAAGCTCTTGACAGG 95332
Query 59451 ATCCAGCAGCGCGCTCAACCCAAGTCTGGTCGGGGCGAACCTC-GAAGAACTGGGGGGTC 59509
|| ||| | |||| ||||| || || || ||| || || ||||||||| || | |
Sbjct 95331 CGCCGGCACCCTGCTCCACCCATGTGTGCTC-AGGCAAAGTTCGGAAGAACTGAGGAGAC 95273
Query 59510 TGCACAATCGC 59520
|| || |||||
Sbjct 95272 TGGACGATCGC 95262
>seq3677
Length=33981
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGG 225505
|| |||||||| ||||||||||| ||||| | | | | | ||| | |||||||
Sbjct 24331 TCCAGGAAGCCGGAGTCGTGGGAAACAATCAAGCTGGTGATTTCCGTGTGCTTCTTGAGG 24272
Query 225506 TGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564
| || || ||||| || | ||| ||||||| ||||| || ||||||||||| ||
Sbjct 24271 TA-GTCTTGCAGCCAGGCAATGTTTGCAACGTCCAAATGGTTAGTCGGTTCGTCCAGTAG 24213
Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624
| || ||||| || || ||||| || | ||| | |||||||| ||||| || ||
Sbjct 24212 GAAGACATCAGCGCGCATAAGCATGGCACGGGCGAGGGCAAGCTTCATCTTCCAACCACC 24153
Query 225625 GGACAGGGAGCCGA 225638
||| || || ||||
Sbjct 24152 GGAAAGAGATCCGA 24139
Score = 86.0 bits (94), Expect = 1e-11
Identities = 154/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020
|||| | ||| |||||| ||||| || | |||||||||||| ||| | |||| |||
Sbjct 24816 GGTCGTCGCCATTGGCATAACGCCATTGCAGGTACTGGTTGGGTGTCTTCTCCATGTGCA 24757
Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080
|||| | || | || |||||||| | ||| | || |||| |||||||||||||
Sbjct 24756 TCTCGACGTGCTCGAGCGCATGCTGCTTGATGTAACCAATACGCAAGTTGGGATGCTTCT 24697
Query 225081 ACACAGAGCCCCGAGTCGGTTG--TG-CCTCGCCGGTGAGGACCTTGATGAGCGTAGTCT 225137
|| ||| |||| | | || | || || || || ||||||||||| || | ||
Sbjct 24696 CGACTTTGCC---AGTCTGCGGGATGACTTCACCAGTCAGAACCTTGATGAGTGTGGACT 24640
Query 225138 TGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACA 225179
|||| || || || | ||| || | | | | ||||| ||||
Sbjct 24639 TGCCGGCTCCGTTTGCGCCGATGATGGCGACACGGGAAGACA 24598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921570443537200
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