Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq671 111 1e-19 >seq671 Length=69493 Score = 111 bits (122), Expect = 1e-19 Identities = 193/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| || || || || |||||| | || ||||||||| |||||||| | ||| Sbjct 26920 AACATGTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATG 26979 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | | ||||| ||| || || || | || | | | || || || || Sbjct 26980 ATGATGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCC 27039 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | || || || | ||||| | ||||||||||||| | || || ||||||| |||| Sbjct 27040 ACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCAC 27099 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 ||||| ||||| || || || | || |||||| | ||||| |||||| | | | Sbjct 27100 TGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCG 27159 Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 |||||||| | || || || ||||| |||||||| || Sbjct 27160 AGGAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCC 27200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441347917608400