Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1133 87.8 1e-12 >seq1133 Length=54950 Score = 87.8 bits (96), Expect = 1e-12 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 || || || || || || || |||||||||||||| |||||||| || | || | || | Sbjct 54939 AGACGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGG 54880 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | |||| || | ||||||||||| || |||||||||||||| ||| || | || ||| Sbjct 54879 C-CGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTC 54821 Query 34029 TTTGTCC 34035 |||||| Sbjct 54820 CTTGTCC 54814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397040575217020