Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq906 122 1e-22
>seq906
Length=144635
Score = 122 bits (134), Expect = 1e-22
Identities = 866/1380 (63%), Gaps = 30/1380 (2%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 61922 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 61981
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| ||||||| || | ||||| |||| | |||| | || || | ||||
Sbjct 61982 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 62041
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| || | || |||||||||||||| || || || || ||||| | || |
Sbjct 62042 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 62101
Query 115706 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762
| | | || | | ||||| || || ||||||| ||| || ||||||||||
Sbjct 62102 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 62158
Query 115763 TATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822
| | ||| | || |||||||| | | ||| | | |||||| | | |
Sbjct 62159 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 62218
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCAC 115882
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 62219 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 62278
Query 115883 CCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 115941
| |||||| || | ||| |||||||| | || || ||||| || ||||||||| |
Sbjct 62279 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 62336
Query 115942 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000
|| ||| | ||||| | ||||| |||||||| || || | ||| | | |||||||
Sbjct 62337 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 62396
Query 116001 ACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 116060
||| | ||| |||| | | ||||||||| || | | | |
Sbjct 62397 ACCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTT 62456
Query 116061 CTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 116120
| |||||| ||| | || || || || |||||||| || |||| || || || ||
Sbjct 62457 ATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTA 62516
Query 116121 TGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177
||||| || || || | || ||| || ||| || ||||| || || ||
Sbjct 62517 AGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGT 62573
Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237
||| || || || |||| ||||||||| ||||| |||| | |||
Sbjct 62574 CTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGC 62633
Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297
|| || | || || ||||| | |||||| | | || || || || | ||| ||
Sbjct 62634 AAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCT 62693
Query 116298 CTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 116356
||| | || ||| | | || || || | || || | | | || ||||| |||
Sbjct 62694 CTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGA 62752
Query 116357 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCA 116412
| |||| || | || |||||||| | | | || | | || | ||| ||
Sbjct 62753 CAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACA 62808
Query 116413 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 116472
| ||| | | || || || | ||||| | || ||||||| | ||||| | |
Sbjct 62809 TCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCG 62868
Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532
|||||||| | ||||| |||| || || || ||||||||| | |||||| ||
Sbjct 62869 GTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGG 62928
Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592
|| ||| ||| || |||||||| | ||| | || | || || || |||
Sbjct 62929 TTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGG 62988
Query 116593 GACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651
| || ||| || || | ||| | | || | | || ||||| || | || |||||
Sbjct 62989 GCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTC 63047
Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTG 116710
|| ||| |||| |||||||||||| || || ||||| | || | || | || || |
Sbjct 63048 CTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACC-ATAGACGTCGGCAAGACCAG 63106
Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770
| || | || || | ||| | ||| || || |||||| |||||||||||||
Sbjct 63107 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 63166
Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830
| || || |||||||| || |||| || || ||| |||| | || || | || || |
Sbjct 63167 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 63226
Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890
| ||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 63227 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 63286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613472613531600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |