Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1133 304 2e-77
seq536 116 5e-21
>seq1133
Length=54950
Score = 304 bits (336), Expect = 2e-77
Identities = 682/1017 (67%), Gaps = 17/1017 (2%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| | | ||| ||||| ||||| | || ||||| || || ||||||||||||||
Sbjct 37350 TCACCGGACAGGATAGCGGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 37291
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || | || || | ||| | || || || |||
Sbjct 37290 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAAACCATCTTCTGGATCTTGGGG 37231
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | ||||| || | || || || |||||||| |
Sbjct 37230 ATACGGGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGCA 37171
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || |||||||| ||||| ||||| | |||| || || |||
Sbjct 37170 TCACGGAGGACACGCTCGACAGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCAGAGCTCC 37111
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| ||||| |||||||| ||||| || ||||| |||| || ||| | | || || ||
Sbjct 37110 TCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATACCCTCGAACAGGGAGTCGATC 37051
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| |||| || || || | || | || ||||| || ||||| || || || ||
Sbjct 37050 TCGATGGAGGTCTGCGCAGAGCTGGACAGGGTGCGCTTGGCACGCTCGCAAGCAGTGCGG 36991
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| ||| || ||||| || | ||| | | || || || || || | || || ||
Sbjct 36990 AGACGGCGGAGGGCGCGAGCGTTGGTAGTCAAGTCCTTTTTGTGCTTTCTCTTGAATTCG 36931
Query 7430 TCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486
| |||||| | || ||| | | || || || |||||||| | ||| || ||
Sbjct 36930 TTGACGAAGTGGTTGACAAGGCGGTTG---TCAAAGTCCTCACCACCAAGGTGAGTGTCA 36874
Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546
|| ||||| | ||||| || |||||||| | || || | | | ||| ||||| ||
Sbjct 36873 CCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATAGTCAGGAGCGAGACATCGAAA 36814
Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTG---TTCTTATC 7602
||||||||||| || || || || || ||||| || ||| | || ||||| ||
Sbjct 36813 GTACCACCACCAAGATCGAAGATCAGGACGTTG----CGCTCGCCAGTGGCCTTCTTGTC 36758
Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCC 7662
|||||||| |||||||| || || || || || || || ||||| || ||| |||||
Sbjct 36757 AAGACCGTAGGCGATAGCAGCAGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCC 36698
Query 7663 AGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722
|||||| | ||||| || || || || || || || ||||| |||||||| |||||
Sbjct 36697 AGCAATGAGACCGGCATCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGAC 36638
Query 7723 CGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782
|| ||||| |||| |||| | |||||| || || || || | || |||| ||
Sbjct 36637 AGTGACGACAGCGTTGTTGACGGTGCCACCGAGGTAAGACTCGGCAGTCTCCCTCATCTT 36578
Query 7783 GGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATC 7842
||| || ||||| || |||||||| |||| | || ||| || || || || ||
Sbjct 36577 GGTGAGGACCATGGAGGAAATCTCCTCAGGAGTGAAAGTCTTCTCCTCGCCCTTGAACTC 36518
Query 7843 AACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCAT 7902
|| | || | ||| || |||| | || |||||| | | | | |||||
Sbjct 36517 GACCTGGATGACGGGCTT-GCCGCTCTTC--TCAATGACCTTAAAGGGGAAGTGCTTCAT 36461
Query 7903 ATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962
||| | ||||||| |||| ||||| | ||||| | |||||| || || || ||
Sbjct 36460 ATCCGCCTGGACCTCGGGGTCGTCGAACTTGCGGCCGATCAAACGCTTAGCGTCGAAGAC 36401
Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019
||||| | |||||||||||| |||||||| || | ||| ||||| ||||| ||
Sbjct 36400 GGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTGGCGGAGTCACCGATCAGACGCTC 36344
>seq536
Length=72312
Score = 116 bits (128), Expect = 5e-21
Identities = 242/358 (68%), Gaps = 3/358 (1%)
Strand=Plus/Minus
Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGA 7460
|| ||||||| || |||| ||||| | |||||| |||||| | | ||||
Sbjct 19825 TACCTTTCTTGGTCTTGCGTTGGAACTCCTTCTTGAAGTGGTCAAGGAGGTTGGTGTCGA 19766
Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520
| || | |||||| | ||| || || || ||||| || ||||| |||| ||| || |
Sbjct 19765 AGTCCTGACCACCAAGGTGAGTGTCACCAGCGGTGGCCTTGACAGTGAAGACACCGCCCT 19706
Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580
|||| | | || ||||| || ||||||||||| ||||| | || || ||||||
Sbjct 19705 GGATGTGCAGAAGGGAGACATCGAAAGTACCACCACCAAGGTCGTAGATCAGGACGTTCC 19646
Query 7581 TATCGTCGTCTTTGTT--CTTATC-GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637
| || | || || | | | ||||||||| || || || || || || || || |
Sbjct 19645 TCTCCTTCTCGGACTTGCCGGAGCCGAGACCGTAGGCAATGGCGGCGGCAGTAGGCTCGT 19586
Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697
|||| ||||| || ||| || || ||||| | | || || || || || || || |
Sbjct 19585 TAATGATACGGAGGACGTTGAGCCCGGCAATGGCACCGGCGTCCTTGGTGGCCTGACGCT 19526
Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
| ||||| |||||||||||||| || | ||| || | | || ||||| |||||
Sbjct 19525 GGTTGTCGTTGAAGTAGGCCGGGACAGTGATGACGGCCTTCTCAACCTTCTTGCCGAG 19468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635096994388400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |