Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq794 98.7 1e-15 >seq794 Length=145786 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663 || || || ||||| ||| ||||||| ||||| || | || ||||| || | || || Sbjct 86271 TGCAAAATCGTTCACGAGCATGGTGGGCAGGTCTACATGGACGGTGCCAACATGAACGCC 86212 Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723 ||| | ||||| || |||| ||| || ||||| || ||||| ||| | || Sbjct 86211 CAGATCGGTCTTTGCTCGCCCGGTGAGATTGGCGCTGATGTCTGCCATCTGAACCTCCAC 86152 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 ||||| ||||||||||| || || || || ||||| || || ||||| || ||||| || Sbjct 86151 AAGACCTTCTGTATTCCCCACGGTGGCGGTGGTCCCGGTGTCGGTCCCATCGGTGTTGCC 86092 Query 159784 AAACATCTCACACCATT 159800 || || ||| | || || Sbjct 86091 AAGCACCTCGCTCCTTT 86075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588018048613600