Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4397 259 9e-64
>seq4397
Length=39634
Score = 259 bits (286), Expect = 9e-64
Identities = 373/521 (72%), Gaps = 19/521 (4%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||||
Sbjct 29770 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 29711
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | ||| ||||| | |||||
Sbjct 29710 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTT--GCCCAGCGCCACCAGC 29653
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
||| | || || ||| |||||||||| | ||||||| || ||||||||| | ||
Sbjct 29652 AGGCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGTCGCGTTCATGCCAAGAAGA 29593
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
| ||||| | ||| | ||||| ||||||||||| |||| || || || | |||
Sbjct 29592 GCGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATC 29533
Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130
| || |||| |||| || || || | ||| | |||| | | |||| |
Sbjct 29532 TTCTCAACGGATTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 29482
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||| ||||| | |||| ||| || || || ||||||| | |||||||| | |
Sbjct 29481 CAGGCGAAGTCGGTATGCATGCCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAA 29422
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||||| || | || |||||||||||||| | ||||||||||| |||||||
Sbjct 29421 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAG 29362
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || |||||||| || |||| | | | |||| | | ||||||||| ||
Sbjct 29361 ATACCCTCGACGGCCGCGAAAGCAATGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAG 29302
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| ||| |||||||| ||||||||||||||||| ||
Sbjct 29301 ATCCAACGAAGGGCCCAGTCGGCCTTCTTCTTGATGCACGG 29261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931480284838400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |