Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1133 430 2e-115 seq536 114 2e-20 seq806 89.7 7e-13 >seq1133 Length=54950 Score = 430 bits (476), Expect = 2e-115 Identities = 985/1477 (67%), Gaps = 22/1477 (1%) Strand=Plus/Plus Query 195412 CTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCC 195471 || |||||| | || ||||| | || || |||| || || ||| || |||||||| Sbjct 36331 CTATACAGACACCGAGCGTCTGATCGGTGACTCCGCCAAGAACCAGGTCGCCATGAACCC 36390 Query 195472 TATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGT 195531 ||| || ||||| ||||| |||||| | || || |||||||| || | || Sbjct 36391 CCACAACACCGTCTTCGACGCTAAGCGTTTGATCGGCCGCAAGTTCGACGACCCCGAGGT 36450 Query 195532 CCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTA 195590 ||| | ||||| ||| ||| | | | | || || | | ||| ||||| Sbjct 36451 CCAGGCGGATATGAAGCACTTCCCCTTTAAGGTCATTGAGAAGAGCGGC----AAGCCCG 36506 Query 195591 TGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTA 195650 | || | || || || | || ||| |||| || |||| || || ||||| || | Sbjct 36507 TCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACTTTCACTCCTGAGGAGATTTCCTCCA 36566 Query 195651 TGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATG 195710 |||| | | ||||||| ||||||||| || |||| | | ||| || || || | | Sbjct 36567 TGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTCGGTGGCACCGTCAACAACG 36626 Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 | || || ||||| || || ||||||| || || || || ||||| || ||||| || | Sbjct 36627 CTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCCG 36686 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 | ||||| || || ||| || | || ||||| || || || || ||||| || | Sbjct 36687 GTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCTGCTATCG 36746 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC---GAAGATAAAAATGTATTGATCTTTGATCTCG 195887 | || ||||| |||||||| || | | || || || ||||||| ||||| | Sbjct 36747 CCTACGGTCTTGACAAGAA---GGCCACTGGCGAGCGCAACGTCCTGATCTTCGATCTTG 36803 Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 |||||||||| || |||||||| || || | ||| || | ||||| ||||| || ||| Sbjct 36804 GTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAGGGTATCTTCGAGGTCAAGT 36863 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-T 196006 | || || ||||| ||||| || |||||||| || || || || ||| || || | Sbjct 36864 CCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTTGACAACCGCCTTGTCAACCACT 36923 Query 196007 TTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTT 196066 | ||| | || ||| ||||| | || || || | || || || | || || Sbjct 36924 TCGTC-AACGAATTCAAGAGAAAGCACAAAAAGGACTTGACTACCAACGCTCGCGCCCTC 36982 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA 196126 || || || | ||||| || || |||||||| || || || || | || || || Sbjct 36983 CGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTGTCCAGCTCTGCGCAGACC 37042 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | ||||| || || |||| || || ||||||||||| || | || |||||||| Sbjct 37043 TCCATCGAGATCGACTCCCTGTTCGAGGGTATTGACTTCTACACCTCCATCACCCGTGCT 37102 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 ||||| || ||| | | || | || | ||||| ||||| || | || Sbjct 37103 CGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCTGTCGAGCGTGTC 37162 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||||| || ||||| || | || || ||||| || || || || Sbjct 37163 CTCCGTGATGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTCGTTGGTGGCTCC 37222 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||||||| || ||||| || ||||| |||| ||||||||| || || ||| Sbjct 37223 ACCCGTATCCCCAAGATCCAGAAGATGGTTTCCGACTTCTTCAACGGCAAGGAGCCCAAC 37282 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| ||||| || ||||| || ||||| ||||| ||||| ||||| || Sbjct 37283 AAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTG 37342 Query 196427 TCAGGTGTTGACAAT------AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCC 196480 || || ||||| | || | | | || ||||||| || ||||| || || Sbjct 37343 TCCGG---TGACACTTCCTCCAAGTCCACCAACGAGATTCTGCTTCTCGATGTCGCTCCT 37399 Query 196481 GTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACA 196540 | ||||| ||| | || || || |||||||| |||||| | || | | ||||| Sbjct 37400 CTCTCCCTCGGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTGATCAAGCGCAACACC 37459 Query 196541 ACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTT 196600 || ||||| || |||||| | ||||| || || | ||| || || || ||||| Sbjct 37460 ACCATTCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTCAGCGACAACCAGCCCGGTGTC 37519 Query 196601 CATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACT 196660 | ||| || || | || || || || | || | ||||| ||| | || || || | Sbjct 37520 CTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGCAAG 37579 Query 196661 TTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTC 196720 ||||| | || || ||||| | || ||| | |||||||| ||||| | || |||| Sbjct 37580 TTCGAGCTCACCGGCATTCCCCCGGCTCCCCGTGGTGTTCCCCAGATCGAGGTCACCTTC 37639 Query 196721 GATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCT 196780 || | || || || || || | |||||| | ||| || |||| ||||||| | Sbjct 37640 GACGTTGATGCCAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGCACTGGCAAGACC 37699 Query 196781 GAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATG 196840 | ||||| || |||||||| |||||||| || || || |||||||| || || |||||| Sbjct 37700 AACAAGATCGTCATTACCAACGACAAGGGCCGTCTGTCCAAGGAGGAGATCGAGCGTATG 37759 Query 196841 GTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || || || || ||||||| || || || |||| Sbjct 37760 CTTGCTGAGGCCGAGAAGTACAAGGCCGAGGATGAGG 37796 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 54463 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACGTCAAGAGC 54522 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| || |||||||| || || || || ||||| || Sbjct 54523 AAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAGCAGCGCCTCATCTTCGCTGGCAAG 54582 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| || || ||| || |||||| | || |||||||| || || ||| Sbjct 54583 CAGCTTGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAGGAGTCGACCCTTCAC 54642 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 54643 CTCGTCCTCCGCCTGCGTGGTGGT 54666 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| |||||| ||||| ||||| ||| |||| | Sbjct 54746 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGAGC 54805 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| |||||||| || || ||||| || || ||||| || || || Sbjct 54806 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCCGGCAAG 54865 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || || || | || |||||| | || |||||| ||||| ||| Sbjct 54866 CAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 54925 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || || ||| Sbjct 54926 CTCGTCCTCCGTCTCCGCGGCGGT 54949 >seq536 Length=72312 Score = 114 bits (126), Expect = 2e-20 Identities = 189/272 (69%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||||| || || || ||||| || |||||||| | ||| ||| Sbjct 19498 ACTGTCCCGGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGTGCCATT 19557 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || || || || || || || || || ||||| || ||| Sbjct 19558 GCCGGGCTCAACGTCCTCCGTATCATTAACGAGCCTACTGCCGCCGCCATTGCCTACGGT 19617 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| || | || || |||||| || || ||||||||| Sbjct 19618 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTGATCTACGACCTTGGTGGTGGT 19677 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | || | || ||| | ||| || ||||| || ||| Sbjct 19678 ACTTTCGATGTCTCCCTTCTGCACATCCAGGGCGGTGTCTTCACTGTCAAGGCCACCGCT 19737 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || |||||| | || ||||| Sbjct 19738 GGTGACACTCACCTTGGTGGTCAGGACTTCGA 19769 >seq806 Length=67444 Score = 89.7 bits (98), Expect = 7e-13 Identities = 218/328 (66%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || |||| | | || || | ||| || | || || || ||| Sbjct 53545 AAGATGAAGGAGACCGCCGAGTCTTACCTTGGCAAGAATGTCAAGAACGCCGTCGTCACT 53604 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || ||||| || | | || | Sbjct 53605 GTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCAGATCTCT 53664 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || ||| || | || |||| || || || || || || | || || ||||| Sbjct 53665 GGCCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACGGCTGCCGCTCTCGCCTACGGTCT 53723 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || ||| | ||||| | | || ||| |||||| ||||||||||| || Sbjct 53724 TGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTATGATCTTGGTGGTGGTACTTT 53777 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| | || |||| | || | || | ||||| || ||| | || ||||| Sbjct 53778 CGATATTTCCATTCTTGAGATCCAGAACGGCGTCTTCGAGGTCAAGTCCACCAACGGTGA 53837 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| || ||||| || || |||||| Sbjct 53838 CACTCACCTCGGTGGCGAGGACTTCGAT 53865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657825313007200