Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3677 84.2 6e-11
>seq3677
Length=33981
Score = 84.2 bits (92), Expect = 6e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 353938 TCGGGGCAGAGTGCAGAATAGAATTC-CCGCTGATGAGATATAATAATCACACCCCCAAG 353996
|||||||||||||| ||| || || || || || || |||| ||||| ||
Sbjct 25434 TCGGGGCAGAGTGCGCCGACGAACTCTTCGTTG-TGGGAAATCATAACAACACCTCCCTT 25376
Query 353997 ATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGG 354056
||| || || | ||||||| |||| | |||||| ||||| | ||| ||||||||
Sbjct 25375 GTAGTCGCGGATGGCGGCGGCGAGACCACCCATCGAGTCGCGGTCCAAGAAGTTAGTAGG 25316
Query 354057 TTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAAC 354116
|||||||||| ||| | || || | ||||||| || |||| | || ||||| ||
Sbjct 25315 CTCGTCAAGGACAAGCAGATGAGGGTTGTTCCACATGGCACCAGCAATGACGACCTTGAC 25256
Query 354117 CTTCTGTCCGCCTGATAG 354134
|||||| || || || ||
Sbjct 25255 CTTCTGACCACCGGACAG 25238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471732551939870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |