Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3677 84.2 6e-11 >seq3677 Length=33981 Score = 84.2 bits (92), Expect = 6e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 353938 TCGGGGCAGAGTGCAGAATAGAATTC-CCGCTGATGAGATATAATAATCACACCCCCAAG 353996 |||||||||||||| ||| || || || || || || |||| ||||| || Sbjct 25434 TCGGGGCAGAGTGCGCCGACGAACTCTTCGTTG-TGGGAAATCATAACAACACCTCCCTT 25376 Query 353997 ATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGG 354056 ||| || || | ||||||| |||| | |||||| ||||| | ||| |||||||| Sbjct 25375 GTAGTCGCGGATGGCGGCGGCGAGACCACCCATCGAGTCGCGGTCCAAGAAGTTAGTAGG 25316 Query 354057 TTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAAC 354116 |||||||||| ||| | || || | ||||||| || |||| | || ||||| || Sbjct 25315 CTCGTCAAGGACAAGCAGATGAGGGTTGTTCCACATGGCACCAGCAATGACGACCTTGAC 25256 Query 354117 CTTCTGTCCGCCTGATAG 354134 |||||| || || || || Sbjct 25255 CTTCTGACCACCGGACAG 25238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471732551939870