Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4397 111 2e-19 >seq4397 Length=39634 Score = 111 bits (122), Expect = 2e-19 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 || || ||||| ||||| || ||||| ||||||||||| | ||||| || | | ||| Sbjct 29543 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGC 29602 Query 50562 ATGAACGCAGAC-ATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50620 |||||||| ||| | |||||| ||||||| ||||| ||||| ||| | || || || Sbjct 29603 ATGAACGC-GACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGC 29661 Query 50621 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50679 |||||| |||| ||| ||||| || | |||||||| || ||| | ||||| | Sbjct 29662 GCTGGG-CAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCT 29720 Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726 || | | ||||| || ||||| ||||| | || || || || ||| Sbjct 29721 CGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTAC 29767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488516458332000