Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq906 260 1e-64 seq4397 172 5e-38 seq1133 113 4e-20 seq4234 91.5 1e-13 >seq906 Length=144635 Score = 260 bits (288), Expect = 1e-64 Identities = 1026/1591 (64%), Gaps = 47/1591 (3%) Strand=Plus/Plus Query 147939 GCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAG 147998 ||||||| || ||||| || ||||||||||| ||||||||||| | ||| | | Sbjct 61939 GCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCG 61998 Query 147999 TCGTGCACCGACGACATGAGCGTGTACGTCG---GGTGCGGCACAAACAGATTAAACGAC 148055 ||||| ||| | ||| | || | ||| ||| | || | ||| | ||| Sbjct 61999 AAGTGCATCGAGG---TGATCTTGCCCATCGTGGGGTCCTTCATGTGGATATTGAGGGAC 62055 Query 148056 TGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTTATC 148112 || || || |||||||| |||||||| |||||||| | || || || |||| Sbjct 62056 TGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGATGGTGCGCTGGGAA 62115 Query 148113 TTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGC 148172 | ||||||| | |||||||| ||| |||||| | ||| || ||| | ||| || Sbjct 62116 ---AGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGATGTTGGGGATCTGC 62172 Query 148173 TGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGC 148232 || | |||||| | |||| || | || ||| | || | | || ||| Sbjct 62173 TGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAGACCACAGTCCGAGG 62232 Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292 || | ||||| | | || || | || || ||||| || || |||||||| || || Sbjct 62233 TCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCACCGGCGAGGACACGG 62292 Query 148293 CGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 || ||| || | ||| ||| | || || || |||| ||| ||| | |||||| Sbjct 62293 CG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGAAGCCGAGAATCTGGCT 62351 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 ||||| || |||||||| || || |||| |||||||| |||| | | || Sbjct 62352 GGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGTACCGTGCTGGGCAAT 62411 Query 148412 TTTGCGCTTCAGAGCCG-CCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACATGTC 148468 | | ||||| ||| | ||||||||||||| ||| | || ||| ||||||||||| Sbjct 62412 CTCGGCCTTCA-AGCTGTCCCAGTCCCAGAGGTCGGTG--GGGGTCTTATTCCACATGTC 62468 Query 148469 GTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 || |||||||| || || || |||||||||| | ||| ||| || |||| | Sbjct 62469 ATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTAAGGGCCGTCCCT 62528 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | || || || || ||| || ||| ||| || |||||| ||||| | Sbjct 62529 CTTGGCGAGCTCAACCGAGGCAGTGAGAGCAGCGTGGTAGATAGTCTCGAAGATTTGAAT 62588 Query 148589 GTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGC 148648 ||| ||| || ||| ||| |||||||||| || | || ||||| || Sbjct 62589 GTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGCAAGGAAAGCGTCAGC 62648 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 ||| || | || || || | || || ||||| |||||| | || ||| Sbjct 62649 AAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCTCTTCCTGGC-TTCTG 62707 Query 148709 GAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAA 148767 || | || |||||||| ||| |||||||||| ||||| || | ||||| |||| Sbjct 62708 GAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGACAAGCACCTGAGTAA 62767 Query 148768 TTCTGCGCAGCAATTCAAAATCGTA---------CTTGTCATCTACGATGCATCGGTTCA 148818 | | ||| | || ||||| || | |||| |||| | | ||| | Sbjct 62768 CCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTCCTCGACATCGACGAAG-GTGGGT--A 62824 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 || | ||| |||| |||||||| || ||||| || ||| ||||||| ||||| | Sbjct 62825 GCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTT 62884 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 || |||||| ||| || || ||| | |||||| || |||||||||| ||||| Sbjct 62885 CGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGC 62944 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995 | ||||||||||| |||| | || || ||||| ||||| | || | || | Sbjct 62945 AGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGCGT 63004 Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCG-TAGCGACCCTCCTGCTCGTATAAA 149054 ||| || | ||| || || || || | || |||||||||| ||| || Sbjct 63005 ACC---AGAGCTTCTGAGCACGGACAGTCT-CGCGACCACGACCCTCCTTCTCATACTGC 63060 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 || || |||||| |||| || ||| ||| | ||||| ||||||| || ||| Sbjct 63061 TCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGG 63120 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 |||||||| | ||| ||||| | | || |||||||| || |||||||| | |||| Sbjct 63121 CACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAG 63180 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG 149234 || ||||| | ||||| || || || || || ||| || |||| | Sbjct 63181 AGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCG 63240 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | |||||| | || || ||||||||||| | ||| | |||| || || |||| Sbjct 63241 AGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGC 63300 Query 149295 TTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||| || |||||||| |||| ||| | ||||||| |||| || | |||||| Sbjct 63301 TTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCATAGGGATG 63360 Query 149352 ATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGC 149411 | ||| || |||||||||||| | |||| ||||| || || | ||| Sbjct 63361 AGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATGCGGTGA 63420 Query 149412 ACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGA 149470 ||||| | ||||| || ||| || ||| ||||| || || ||| | || || Sbjct 63421 ACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCTTC-AGGGTGTC 63479 Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATG 149501 |||||| ||||| ||||| || ||||||| Sbjct 63480 GTAGATACCCTCAATGCTATCCTCCTTCATG 63510 >seq4397 Length=39634 Score = 172 bits (190), Expect = 5e-38 Identities = 346/505 (69%), Gaps = 11/505 (2%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || ||||| ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 29770 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 29711 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| ||| ||| |||| ||| | ||||| | || ||||| Sbjct 29710 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAG 29651 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || || ||||| ||||||| ||||||| || | |||||||||||| || | | Sbjct 29650 GCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGT-CGCGTTCATGCCAAGAAGAG 29592 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGA--ACAT 120587 | || || | || ||||| ||||||||||| || || || ||||| ||| | | Sbjct 29591 CGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATCT 29532 Query 120588 GGCGAGCATAGT-GTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 | | | | | ||| |||| || | || |||| ||| | | |||||| | Sbjct 29531 TCTCAACGGATTCGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCAGG 29478 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 | ||||| || |||| |||||| ||||| || || ||||| ||| || |||| || | Sbjct 29477 CGAAGTCGGTATGCATGCCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAG 29418 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||||| ||| | |||||| |||| |||| ||| || ||| ||||| | | Sbjct 29417 GCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATAC 29358 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCC 120826 |||| ||| || || || | | |||| || || |||| ||||| | ||||| Sbjct 29357 CCTCGACGGCCGCGAAAGCAATGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCC 29298 Query 120827 ACTTCATGGCCCACTCGGCCTTTTT 120851 | | |||||| |||||||| || Sbjct 29297 AACGAAGGGCCCAGTCGGCCTTCTT 29273 >seq1133 Length=54950 Score = 113 bits (124), Expect = 4e-20 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| ||| || ||| |||||||||||||||||| ||| | Sbjct 54913 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 54854 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| || ||||||||||| || || ||||| |||||||| |||||| ||||| | Sbjct 54853 AATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 54794 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | |||||| | | ||| || |||| ||||| ||| ||||| |||| Sbjct 54793 GTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 54744 Score = 111 bits (122), Expect = 2e-19 Identities = 131/175 (75%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| |||| | ||| | | | ||||| |||||||||| Sbjct 54636 GGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCA-TCCTCAAGCTGCTTGC 54578 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| |||||||| || || || |||||||||||||| |||||| || Sbjct 54577 CAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCT 54518 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | ||||| | | ||| || |||| ||||| ||| |||||||| Sbjct 54517 TGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 54463 >seq4234 Length=93090 Score = 91.5 bits (100), Expect = 1e-13 Identities = 87/109 (80%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| ||| || ||| | | | |||||||||||||||| Sbjct 35727 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCGAGCTGCTTGC 35785 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 ||||| | || || ||||||||||| || || ||||| |||||||| || Sbjct 35786 CCGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGT 35834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483393547152400