Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2091 84.2 2e-11 >seq2091 Length=46094 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 31494 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 31553 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 31554 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 31612 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 31613 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 31672 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 31673 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 31732 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 31733 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 31783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397434153582550