Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq906 138 1e-27
seq4397 95.1 1e-14
>seq906
Length=144635
Score = 138 bits (152), Expect = 1e-27
Identities = 257/373 (69%), Gaps = 6/373 (2%)
Strand=Plus/Minus
Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666
|| |||| |||| || ||||| ||||| || ||| || | || || || | |||
Sbjct 63289 CTTTCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTA 63230
Query 104667 TCAACCAAGGTGACGAGGAGG--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCC 104724
||||| || | ||||||| |||| | || || || |||| |||||||||||||||
Sbjct 63229 AGAACCACGGAAAAGAGGAGGTTCGCGCT--CGTGACCTTTTCTACGCTCTCTGGATTCC 63172
Query 104725 AGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAA 104784
||||||||||||||| | |||||| ||| |||| ||| | ||| | || || || |
Sbjct 63171 CGATCTCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGA 63112
Query 104785 GGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGA 104844
| |||||||| |||| | | |||||||| || || ||||| ||| |||| ||
Sbjct 63111 GTGCCCTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGA 63052
Query 104845 GGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCA 104903
| | || ||||| | | ||| || | ||| | || | | ||| | || || |||
Sbjct 63051 GAAGGAGGGTCGTGGTCGCGAGACTGTCCGTGCT-CAGAAGCTCTGGTACGCGATCCTCG 62993
Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963
|| | || ||| || |||| || | |||| | ||||| ||| ||| |||| ||||
Sbjct 62992 AGGCCCAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGA 62933
Query 104964 GTAATCAAAAGAA 104976
| || || |||||
Sbjct 62932 GCAACCAGAAGAA 62920
>seq4397
Length=39634
Score = 95.1 bits (104), Expect = 1e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 94806 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTAT 94865
||| ||| | || || ||| || ||||||||||||||| || || ||| | | ||
Sbjct 29329 GCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCAT 29388
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
|| |||||||||||||| || |||||||| ||| | |||||||| ||||| |||||
Sbjct 29389 TTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTC 29448
Query 94926 TCGTGACGAGGG 94937
||| || |||||
Sbjct 29449 TCGCGATGAGGG 29460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583227918672400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |