Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1133 87.8 2e-12
>seq1133
Length=54950
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || |||||||| || || || || || |||| || || || |||| || |||||
Sbjct 54924 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGC 54865
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 54864 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 54805
Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 54804 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 54746
Query 39261 CA 39262
||
Sbjct 54745 CA 54744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429521989757630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |