Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1133 95.1 9e-15 >seq1133 Length=54950 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| ||||||||||| |||| || ||| |||| || Sbjct 54930 ACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCG 54871 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || |||| |||||||| || | || | || ||||| ||| Sbjct 54870 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 54811 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||||||| || || ||||| | || || ||||| Sbjct 54810 ATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTG 54751 Query 44309 CCCGT 44313 || || Sbjct 54750 CCAGT 54746 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| ||| ||| ||| | || || Sbjct 54647 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCA 54588 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||||| | || | |||||||| ||| Sbjct 54587 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGG 54528 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || || ||||| | || || ||||| Sbjct 54527 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTG 54468 Query 44309 CCCGTGA 44315 || |||| Sbjct 54467 CCGGTGA 54461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359970612902670