Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq4009 152 1e-31
>seq4009
Length=43835
Score = 152 bits (168), Expect = 1e-31
Identities = 189/256 (74%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || || || || || | ||| ||||||||| | |||||| |||| |||||
Sbjct 33735 ATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCC-GTCGC 33793
Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| ||||||||||||| || ||| | ||||||||||| ||||| || |||||| |
Sbjct 33794 TCTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCT 33853
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| || || || || || |||| |||||||| | |||||||| | || |||||
Sbjct 33854 GCTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGA 33913
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| ||| ||||| | || ||||| ||||||||||| ||||| || ||||||| ||||
Sbjct 33914 GAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 33973
Query 230625 GCCTGGTGTGATGAAG 230640
| | ||||| ||| ||
Sbjct 33974 GGCGGGTGTCATGGAG 33989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057768105902120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |