Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10- 07] 4,124 sequences; 47,007,994 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1456 91.5 1e-13 >seq1456 Length=54918 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||| |||||| || ||||| ||||| | | Sbjct 54916 CCGCCGCGGAGACGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 54857 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || |||| || | |||||||||| ||| Sbjct 54856 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 54797 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | | ||| Sbjct 54796 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACC 54737 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 54736 TCGAGGGTGATGGTCTTGCCAGT 54714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422237976724784