Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10- 07] 4,124 sequences; 47,007,994 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1457 95.1 8e-15 >seq1457 Length=54532 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796 |||||||||||| || ||| |||||| | | || |||| |||||| || ||||| Sbjct 12064 CAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAA 12123 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 | || ||||||||| ||||| || || |||||||| || || || | |||| | ||| Sbjct 12124 GTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCC 12183 Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916 | || | || || | || || || | ||||||||||| || || |||||| Sbjct 12184 GACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGA 12243 Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 ||| || || |||| ||| ||| |||||||| || || || ||||||| Sbjct 12244 GAGAGGCTTCGATGATGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGC 12300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340120504259052