Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1457 95.1 8e-15
>seq1457
Length=54532
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796
|||||||||||| || ||| |||||| | | || |||| |||||| || |||||
Sbjct 12064 CAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAA 12123
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
| || ||||||||| ||||| || || |||||||| || || || | |||| | |||
Sbjct 12124 GTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCC 12183
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916
| || | || || | || || || | ||||||||||| || || ||||||
Sbjct 12184 GACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGA 12243
Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973
||| || || |||| ||| ||| |||||||| || || || |||||||
Sbjct 12244 GAGAGGCTTCGATGATGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGC 12300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340120504259052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |