Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10- 07] 4,124 sequences; 47,007,994 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1456 96.9 3e-15 >seq1456 Length=54918 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || || |||||||| ||| Sbjct 54636 ATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 54577 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| || ||| ||||| || || |||||| ||||||| ||||| || ||||| Sbjct 54576 CTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGG 54517 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | || | |||||| | || ||| Sbjct 54516 GGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCG 54457 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | || |||||||| Sbjct 54456 ACCTCGAGGGTGATGGTCTTGCCGGT 54431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420113283519888