Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4009 268 2e-66
seq3624 210 4e-49
seq3846 86.0 1e-11
>seq4009
Length=43835
Score = 268 bits (296), Expect = 2e-66
Identities = 599/901 (66%), Gaps = 75/901 (8%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || || |||||| || ||||||||||| || |||||||
Sbjct 33082 ATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTTTCCAAGGAT 33141
Query 42369 ACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| |||| | | || || |||| || ||| || || | ||
Sbjct 33142 CTTCACGACTGGAACAAGCGCCTCAACGATGACGAGCGCTTCTTCATCTCCCACGTCCTC 33201
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|| ||||||||||| ||||||||||| || || |||||||| | | | ||||
Sbjct 33202 GCTTTCTTCGCCGCGTCTGACGGCATCGTGAACGAGAACCTCGTCGAACGCTTCAGCTCC 33261
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
||||| ||| | ||||| |||||||||||||| |||||||| || |||||| |
Sbjct 33262 GAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATC 33321
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605
|| |||||| ||| | || || |||| |||||| || ||| |||| |||
Sbjct 33322 CATTCTGAGACCTACTCGCTTCTCATCGACACATACATCAGCGAGCCCAGGCAGCGCAAC 33381
Query 42606 GGGCTGTTCAAGGCCATGGAGA--------------------CGATG------------- 42632
|| ||||| ||||| || | |||||
Sbjct 33382 TATCTTTTCAACGCCATTGATAACAGTAAGCCCAATCCGCCTCGATGATGCAAAGCTTGG 33441
Query 42633 --------------------CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGA 42672
|| ||||||||||||||||| |||||||| || ||||
Sbjct 33442 ATCGCTAAAGTACTATAGTCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTTCGTTGGA 33501
Query 42673 TCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGC 42731
|| | | | || | | || |||| | | || | || || | |||||||||||
Sbjct 33502 TCT-GCGACAAGAACTCGACCTTCGCATCGCGCCTCATTGCTTTCGCGGCCGTCGAGGGT 33560
Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCC 42790
||||||||| ||| | ||||||||||| |||||||||||| || || || |||||
Sbjct 33561 ATCTTCTTCAGCGGCTCTTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTC-ATGCC 33619
Query 42791 CGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGC 42850
|| | || ||||| || || |||||| | || ||||| |||||| ||||| ||
Sbjct 33620 TGGTTTGACTTTCTCCAATGAGCTCATCTCTCGCGATGAGGGCATGCATACCGACTTCGC 33679
Query 42851 CTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG----GG 42906
|||||| ||||||||| ||| ||| | |||||| || || |||| |
Sbjct 33680 CTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCC----AGCCCCGAATCCGTTGAGA 33732
Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966
|||||||| ||||| || |||||||||||||||||||||||| | | || |||||
Sbjct 33733 AGATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCG 33792
Query 42967 CCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025
| || | |||||||| | |||| ||||||||| |||||||| ||| ||| || ||||
Sbjct 33793 CTCTTCTTGGCATGAA-CGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGC 33851
Query 43026 CTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTAT 43084
|| || ||| | | |||| || ||||||| || | |||||||||||| ||
Sbjct 33852 CTGCTGGTGGC-GCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCAT 33910
Query 43085 GGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||||| | | |||||||| ||||| |||||||||||||| | ||||||||
Sbjct 33911 GGAGAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCA 33970
Query 43145 G 43145
|
Sbjct 33971 G 33971
>seq3624
Length=35007
Score = 210 bits (232), Expect = 4e-49
Identities = 486/727 (67%), Gaps = 4/727 (1%)
Strand=Plus/Minus
Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752
|||||| || || || || || | |||||||| ||| || ||| ||| |||||
Sbjct 24770 GTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTTCGCAGCACAGGTTGGA 24711
Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812
|| |||||||| |||| || || ||| |||| ||||||| ||||||||| |
Sbjct 24710 GCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAA 24651
Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAG 244871
||||||||| ||||| |||| |||||| |||||| ||| || |||||| | | ||
Sbjct 24650 CATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGC-GTACCAGAGCTTCTGAG 24592
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
| ||| ||| |||| | ||||| ||| || | ||| ||||||||||| |
Sbjct 24591 CACGGACAGTCTCGCGACCACGACCCTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATT 24532
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991
| || |||| ||| | || || |||||| ||||||||||| |||| ||
Sbjct 24531 CCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGC 24472
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || || | || ||||||||| ||||| |||||||| || | ||| ||||| |
Sbjct 24471 CGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCAC 24412
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
| | ||| || || |||||| | || || | |||| ||||| ||
Sbjct 24411 GAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAG 24352
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
| ||||| ||||| | ||||| |||| || ||||| |||||||| || |||||||| |
Sbjct 24351 CATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAA 24292
Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| | | || | |||| | | || || |||| | | |||||| | ||||
Sbjct 24291 CGTAGCGGGC-AGTGTTGTTGTACACACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCG 24233
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290
|| || || |||||| ||| || | | || | | | | || || | ||
Sbjct 24232 TTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATGCGGTGAACGTTCAGACCGATACCA 24173
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
|||||| ||||||||| | ||| ||| |||| | |||||| || ||||| |||||
Sbjct 24172 CCGGCGGTCTTGGAGATCATGGCACAGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTA 24113
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410
||| |||||||| || || ||||| || | || ||| |||||||| | | | |||
Sbjct 24112 TCCTCCTTCATGTCGATGAGGAAGCAAGAAGCCAACTGAGGCTTGGGAGTACCAGCATTG 24053
Query 245411 AACAGAG 245417
|||||||
Sbjct 24052 AACAGAG 24046
>seq3846
Length=106470
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002
||| | ||||| ||| | || || |||||||| |||||||||||| |||| || | |
Sbjct 49869 ATGCGCTTCCCAGACCGCACGACGCCGATCGGGCAGATGATCAACGCGTATCTCACCGGC 49928
Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062
|||||| | || || |||||| | ||||| || ||||| || ||||| ||||||||
Sbjct 49929 GCGAGCGAGCAAGAGGACCACGTCATTCACCTGCTCTTCTCTGCAAACCGCTGGGAAGCT 49988
Query 243063 GC 243064
||
Sbjct 49989 GC 49990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944290519314240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |