Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq4009 123 5e-23
seq3928 87.8 4e-12
>seq4009
Length=43835
Score = 123 bits (136), Expect = 5e-23
Identities = 169/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || || | ||| ||||| ||| | |||||| |||| |
Sbjct 33735 ATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCT 33794
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
||| ||||||||||| | |||||| | ||||||||||| ||||| || |||||| |
Sbjct 33795 CTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTG 33854
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | ||||| || | |||| |||||||| | |||||||| | ||| ||||||
Sbjct 33855 CTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAG 33914
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
||| ||||| | || || || ||||||||||| ||||| || |||| || ||
Sbjct 33915 AACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCA 33970
>seq3928
Length=94703
Score = 87.8 bits (96), Expect = 4e-12
Identities = 126/175 (72%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||||||| |||| || || ||||| || || | ||||| | ||
Sbjct 4107 GGGGAAACCCTCAAGCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTACCGGAACC 4166
Query 334241 GTTTGG-CCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCA 334299
||| || |||| | ||||||||||||| |||||||||||| | | || | ||| |
Sbjct 4167 GTTGGGGCCCAGA-AGACCGTAGCGGTGGCCACGCTTCAGACGCAGGTGAGTCTGGTTGA 4225
Query 334300 GAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
| ||||| || |||| || ||||| || || || | ||||||||||||||
Sbjct 4226 GCAGAATCTTGGCACCGTAGGCCAGGGAGAAAGTGCAGTTGCACAGATCCTCACC 4280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102821725199400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |