Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10- 07] 4,124 sequences; 47,007,994 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3624 138 1e-27 seq3865 89.7 6e-13 >seq3624 Length=35007 Score = 138 bits (152), Expect = 1e-27 Identities = 865/1378 (63%), Gaps = 26/1378 (2%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| ||||| || ||||| | |||||||||||||| || |||||||| | Sbjct 25689 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 25630 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | ||||||| || | |||||||||| | |||| | || || | |||| Sbjct 25629 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 25570 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || || | || |||||||||||||| ||||| || || ||||| | || | Sbjct 25569 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 25510 Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801 | | | || | | ||||| || || ||||||| ||| || |||||||||| Sbjct 25509 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 25453 Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861 | | ||| | || || ||||| | | ||| | | |||||| | | | Sbjct 25452 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 25393 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921 |||| || || | | ||| |||| || ||| | |||||||| || |||| Sbjct 25392 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 25333 Query 113922 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 | |||||| || | ||| ||||| || | || || ||||| || ||||||||| Sbjct 25332 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGAAG 25274 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 || | || ||| ||| ||||| |||||||| || || | ||| | | ||| ||| | Sbjct 25273 CCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGTA 25214 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 114100 || | | ||| |||| | | ||||||||| || | | | | Sbjct 25213 CCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTTA 25154 Query 114101 TGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTAT 114160 | |||||| ||| | || || || || ||||| || || |||| || || ||||| Sbjct 25153 TTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTAA 25094 Query 114161 GGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217 ||||| || || || | || ||| || ||| || ||||| || || ||| Sbjct 25093 GGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGTC 25037 Query 114218 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 114277 || || || || |||| ||||||||| ||||| |||| | || | Sbjct 25036 TCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGCA 24977 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | || | || || ||||| | |||||| | | || || || || | ||| || | Sbjct 24976 AGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCTC 24917 Query 114338 TTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396 || | || ||| | | || || || | || || | | | || ||||| ||| Sbjct 24916 TTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGAC 24858 Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCAT 114452 | |||| || | || |||||||| | | | || | | || | ||| ||| Sbjct 24857 AAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACAT 24802 Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||| | | || || || | ||||| | || ||||||| | ||||| | | | Sbjct 24801 CGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGG 24742 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 ||||||| | ||||| |||| || || || ||||||||| | |||||| || | Sbjct 24741 TGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGT 24682 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | ||| ||| || |||||||| | |||| | || | || || || |||| Sbjct 24681 TGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGG 24622 Query 114633 ACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691 || ||| || || | ||||| | || | | || ||||| || | || |||||| Sbjct 24621 CCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTCC 24563 Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 | ||| |||| ||||||||| || || || ||||| | | || | || || || Sbjct 24562 TTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGG 24503 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811 || | ||||| | ||| | ||| || || ||||||||||||||||||||| Sbjct 24502 CACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGA 24443 Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871 || || ||||||||||| |||| || || ||| |||| | || || | || || || Sbjct 24442 TCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTC 24383 Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 ||| | || | |||| | || ||| || |||||||| || ||||| | |||| Sbjct 24382 TTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 24325 >seq3865 Length=68630 Score = 89.7 bits (98), Expect = 6e-13 Identities = 164/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 10958 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT-TGATTTTCACGGGCAAC 11016 || |||| || || |||||||||||||||| || || || || | ||| || || Sbjct 2525 TTGCCGATAGCATCGATTTCATCGATGAAAATAATGCAGGGGGTGCTCTTC-CGCGCTGT 2583 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076 | | || | || |||||||| || ||||||||||| ||||| ||||| || | || Sbjct 2584 TGCGAAAAGGTCACGGACTCTAGAGGGGCCGACACCCACGAACATCTCCACGAACTCGGA 2643 Query 11077 GGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135 || ||| | || ||| || || | |||||||| || |||| ||||| | | Sbjct 2644 ACCGCTAACGCT-GAAGAAAGGCACTTGAGATTCACCGGCAGTGGCCTTAGCGAGCAACG 2702 Query 11136 TCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 |||| || || || || |||| ||||| ||||||||| ||||| ||||||| Sbjct 2703 TCTTACCGGTACCGGGAGGACCTGAGAGAATGGCACCACGCGGGATTTTGGCACC 2757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597322806421920