Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq3624 138 1e-27
seq3865 89.7 6e-13
>seq3624
Length=35007
Score = 138 bits (152), Expect = 1e-27
Identities = 865/1378 (63%), Gaps = 26/1378 (2%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 25689 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 25630
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| ||||||| || | |||||||||| | |||| | || || | ||||
Sbjct 25629 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 25570
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| || | || |||||||||||||| ||||| || || ||||| | || |
Sbjct 25569 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 25510
Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801
| | | || | | ||||| || || ||||||| ||| || ||||||||||
Sbjct 25509 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 25453
Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861
| | ||| | || || ||||| | | ||| | | |||||| | | |
Sbjct 25452 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 25393
Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 25392 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 25333
Query 113922 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980
| |||||| || | ||| ||||| || | || || ||||| || |||||||||
Sbjct 25332 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGAAG 25274
Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040
|| | || ||| ||| ||||| |||||||| || || | ||| | | ||| ||| |
Sbjct 25273 CCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGTA 25214
Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 114100
|| | | ||| |||| | | ||||||||| || | | | |
Sbjct 25213 CCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTTA 25154
Query 114101 TGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTAT 114160
| |||||| ||| | || || || || ||||| || || |||| || || |||||
Sbjct 25153 TTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTAA 25094
Query 114161 GGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217
||||| || || || | || ||| || ||| || ||||| || || |||
Sbjct 25093 GGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGTC 25037
Query 114218 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 114277
|| || || || |||| ||||||||| ||||| |||| | || |
Sbjct 25036 TCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGCA 24977
Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337
| || | || || ||||| | |||||| | | || || || || | ||| || |
Sbjct 24976 AGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCTC 24917
Query 114338 TTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396
|| | || ||| | | || || || | || || | | | || ||||| |||
Sbjct 24916 TTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGAC 24858
Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCAT 114452
| |||| || | || |||||||| | | | || | | || | ||| |||
Sbjct 24857 AAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACAT 24802
Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512
||| | | || || || | ||||| | || ||||||| | ||||| | | |
Sbjct 24801 CGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGG 24742
Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572
||||||| | ||||| |||| || || || ||||||||| | |||||| || |
Sbjct 24741 TGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGT 24682
Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632
| ||| ||| || |||||||| | |||| | || | || || || ||||
Sbjct 24681 TGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGG 24622
Query 114633 ACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691
|| ||| || || | ||||| | || | | || ||||| || | || ||||||
Sbjct 24621 CCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTCC 24563
Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751
| ||| |||| ||||||||| || || || ||||| | | || | || || ||
Sbjct 24562 TTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGG 24503
Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811
|| | ||||| | ||| | ||| || || |||||||||||||||||||||
Sbjct 24502 CACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGA 24443
Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871
|| || ||||||||||| |||| || || ||| |||| | || || | || || ||
Sbjct 24442 TCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTC 24383
Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929
||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 24382 TTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 24325
>seq3865
Length=68630
Score = 89.7 bits (98), Expect = 6e-13
Identities = 164/235 (70%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 10958 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT-TGATTTTCACGGGCAAC 11016
|| |||| || || |||||||||||||||| || || || || | ||| || ||
Sbjct 2525 TTGCCGATAGCATCGATTTCATCGATGAAAATAATGCAGGGGGTGCTCTTC-CGCGCTGT 2583
Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076
| | || | || |||||||| || ||||||||||| ||||| ||||| || | ||
Sbjct 2584 TGCGAAAAGGTCACGGACTCTAGAGGGGCCGACACCCACGAACATCTCCACGAACTCGGA 2643
Query 11077 GGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135
|| ||| | || ||| || || | |||||||| || |||| ||||| | |
Sbjct 2644 ACCGCTAACGCT-GAAGAAAGGCACTTGAGATTCACCGGCAGTGGCCTTAGCGAGCAACG 2702
Query 11136 TCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190
|||| || || || || |||| ||||| ||||||||| ||||| |||||||
Sbjct 2703 TCTTACCGGTACCGGGAGGACCTGAGAGAATGGCACCACGCGGGATTTTGGCACC 2757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597322806421920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |