Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1456 161 1e-34
seq3796 102 9e-17
>seq1456
Length=54918
Score = 161 bits (178), Expect = 1e-34
Identities = 143/176 (81%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| ||||||||||| |||||||| |||| |||||||||||||||
Sbjct 54886 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 54827
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
||||| |||| |||||||||||| | || | || |||||||||| |||||| |||||
Sbjct 54826 GCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 54767
Query 46517 AGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| ||| | | | ||||||||||| || || || | |||||||| ||||| ||||
Sbjct 54766 A-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 54712
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| |||||||| | || || ||||||||||| |||||
Sbjct 54598 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 54539
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||| || | || | || ||||||||| |||||| |||||| |||
Sbjct 54538 GATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGT 54480
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | ||||| ||| || || || | |||||||| ||||| ||
Sbjct 54479 TGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 54431
>seq3796
Length=68498
Score = 102 bits (112), Expect = 9e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| |||||||| | || |||||||||||||| |||||
Sbjct 32781 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 32722
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| ||||||||||| | || | || |||||||||
Sbjct 32721 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 32683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565209261960480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |