Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3624 129 7e-25
seq4009 95.1 2e-14
>seq3624
Length=35007
Score = 129 bits (142), Expect = 7e-25
Identities = 426/652 (65%), Gaps = 19/652 (3%)
Strand=Plus/Plus
Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785
|| ||||| |||||||| || | || || || | ||| ||||| || | | |||
Sbjct 24048 CTGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAG 24107
Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845
|||||| || | || || |||| ||| || | |||||| ||||| |||
Sbjct 24108 GAGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACC 24167
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGG 111904
|| ||||||||||| || || | || || | |||| | | | ||| ||
Sbjct 24168 GCCGGTGGTATCGGTCTGAACGTTCACCGCATCCGTGCCA-CTGGCAGCTACATTGCCGG 24226
Query 111905 TACAAATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
||| || || | | || | || | || || ||||| || || | ||| ||| || |
Sbjct 24227 TACTAACGGCACCAGCA-ACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCC 24285
Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGC 112017
|||| || |||| | ||| | |||| || || |||| |||| || ||||
Sbjct 24286 GCTACGTTGACCAGGGTGG---TAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGC 24342
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
| ||||| || ||| || | || || || | ||| ||||| || | |||||||
Sbjct 24343 CGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGG 24402
Query 112078 --CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135
|||| | || || || |||| ||||||||||||||| ||||||||||||||| | ||
Sbjct 24403 TTCGCGCT--CGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 24460
Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195
|||| ||| |||| ||| | ||| | || || || || || ||||| |||| |
Sbjct 24461 TGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGT 24520
Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255
| |||||||| || || ||||||||| |||| ||| | || |||| | |
Sbjct 24521 CTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCGA 24580
Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
||| || | ||| | || | | ||| | || || ||| || | || ||| || ||||
Sbjct 24581 GACTGTCCGTGCT-CAGAAGCTCTGGTACGCGATCCTCGAGGCCCAGGTCGAAACCGGTA 24639
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366
|| | ||| | ||||| ||| ||| |||| ||||| || || |||||
Sbjct 24640 ACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAA 24691
>seq4009
Length=43835
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 102182 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTAT 102241
||| ||| | || || ||| || ||||||||||||||| || || ||| | | ||
Sbjct 33530 GCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCAT 33589
Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301
|| |||||||||||||| || |||||||| ||| | |||||||| ||||| |||||
Sbjct 33590 TTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTC 33649
Query 102302 TCGTGACGAGGG 102313
||| || |||||
Sbjct 33650 TCGCGATGAGGG 33661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620710400729280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |