Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10- 07] 4,124 sequences; 47,007,994 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1456 430 2e-115 seq3880 120 4e-22 seq3883 89.7 7e-13 >seq1456 Length=54918 Score = 430 bits (476), Expect = 2e-115 Identities = 985/1477 (67%), Gaps = 22/1477 (1%) Strand=Plus/Plus Query 195412 CTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCC 195471 || |||||| | || ||||| | || || |||| || || ||| || |||||||| Sbjct 36325 CTATACAGACACCGAGCGTCTGATCGGTGACTCCGCCAAGAACCAGGTCGCCATGAACCC 36384 Query 195472 TATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGT 195531 ||| || ||||| ||||| |||||| | || || |||||||| || | || Sbjct 36385 CCACAACACCGTCTTCGACGCTAAGCGTTTGATCGGCCGCAAGTTCGACGACCCCGAGGT 36444 Query 195532 CCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTA 195590 ||| | ||||| ||| ||| | | | | || || | | ||| ||||| Sbjct 36445 CCAGGCGGATATGAAGCACTTCCCCTTTAAGGTCATTGAGAAGAGCGGC----AAGCCCG 36500 Query 195591 TGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTA 195650 | || | || || || | || ||| |||| || |||| || || ||||| || | Sbjct 36501 TCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACTTTCACTCCTGAGGAGATTTCCTCCA 36560 Query 195651 TGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATG 195710 |||| | | ||||||| ||||||||| || |||| | | ||| || || || | | Sbjct 36561 TGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTCGGTGGCACCGTCAACAACG 36620 Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 | || || ||||| || || ||||||| || || || || ||||| || ||||| || | Sbjct 36621 CTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCCG 36680 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 | ||||| || || ||| || | || ||||| || || || || ||||| || | Sbjct 36681 GTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCTGCTATCG 36740 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC---GAAGATAAAAATGTATTGATCTTTGATCTCG 195887 | || ||||| |||||||| || | | || || || ||||||| ||||| | Sbjct 36741 CCTACGGTCTTGACAAGAA---GGCCACTGGCGAGCGCAACGTCCTGATCTTCGATCTTG 36797 Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 |||||||||| || |||||||| || || | ||| || | ||||| ||||| || ||| Sbjct 36798 GTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAGGGTATCTTCGAGGTCAAGT 36857 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-T 196006 | || || ||||| ||||| || |||||||| || || || || ||| || || | Sbjct 36858 CCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTTGACAACCGCCTTGTCAACCACT 36917 Query 196007 TTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTT 196066 | ||| | || ||| ||||| | || || || | || || || | || || Sbjct 36918 TCGTC-AACGAATTCAAGAGAAAGCACAAAAAGGACTTGACTACCAACGCTCGCGCCCTC 36976 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA 196126 || || || | ||||| || || |||||||| || || || || | || || || Sbjct 36977 CGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTGTCCAGCTCTGCGCAGACC 37036 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | ||||| || || |||| || || ||||||||||| || | || |||||||| Sbjct 37037 TCCATCGAGATCGACTCCCTGTTCGAGGGTATTGACTTCTACACCTCCATCACCCGTGCT 37096 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 ||||| || ||| | | || | || | ||||| ||||| || | || Sbjct 37097 CGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCTGTCGAGCGTGTC 37156 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||||| || ||||| || | || || ||||| || || || || Sbjct 37157 CTCCGTGATGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTCGTTGGTGGCTCC 37216 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||||||| || ||||| || ||||| |||| ||||||||| || || ||| Sbjct 37217 ACCCGTATCCCCAAGATCCAGAAGATGGTTTCCGACTTCTTCAACGGCAAGGAGCCCAAC 37276 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| ||||| || ||||| || ||||| ||||| ||||| ||||| || Sbjct 37277 AAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTG 37336 Query 196427 TCAGGTGTTGACAAT------AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCC 196480 || || ||||| | || | | | || ||||||| || ||||| || || Sbjct 37337 TCCGG---TGACACTTCCTCCAAGTCCACCAACGAGATTCTGCTTCTCGATGTCGCTCCT 37393 Query 196481 GTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACA 196540 | ||||| ||| | || || || |||||||| |||||| | || | | ||||| Sbjct 37394 CTCTCCCTCGGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTGATCAAGCGCAACACC 37453 Query 196541 ACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTT 196600 || ||||| || |||||| | ||||| || || | ||| || || || ||||| Sbjct 37454 ACCATTCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTCAGCGACAACCAGCCCGGTGTC 37513 Query 196601 CATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACT 196660 | ||| || || | || || || || | || | ||||| ||| | || || || | Sbjct 37514 CTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGCAAG 37573 Query 196661 TTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTC 196720 ||||| | || || ||||| | || ||| | |||||||| ||||| | || |||| Sbjct 37574 TTCGAGCTCACCGGCATTCCCCCGGCTCCCCGTGGTGTTCCCCAGATCGAGGTCACCTTC 37633 Query 196721 GATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCT 196780 || | || || || || || | |||||| | ||| || |||| ||||||| | Sbjct 37634 GACGTTGATGCCAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGCACTGGCAAGACC 37693 Query 196781 GAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATG 196840 | ||||| || |||||||| |||||||| || || || |||||||| || || |||||| Sbjct 37694 AACAAGATCGTCATTACCAACGACAAGGGCCGTCTGTCCAAGGAGGAGATCGAGCGTATG 37753 Query 196841 GTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || || || || ||||||| || || || |||| Sbjct 37754 CTTGCTGAGGCCGAGAAGTACAAGGCCGAGGATGAGG 37790 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 54431 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACGTCAAGAGC 54490 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| || |||||||| || || || || ||||| || Sbjct 54491 AAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAGCAGCGCCTCATCTTCGCTGGCAAG 54550 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| || || ||| || |||||| | || |||||||| || || ||| Sbjct 54551 CAGCTTGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAGGAGTCGACCCTTCAC 54610 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 54611 CTCGTCCTCCGCCTGCGTGGTGGT 54634 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| |||||| ||||| ||||| ||| |||| | Sbjct 54714 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGAGC 54773 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| |||||||| || || ||||| || || ||||| || || || Sbjct 54774 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCCGGCAAG 54833 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || || || | || |||||| | || |||||| ||||| ||| Sbjct 54834 CAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 54893 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || || ||| Sbjct 54894 CTCGTCCTCCGTCTCCGCGGCGGT 54917 >seq3880 Length=15246 Score = 120 bits (132), Expect = 4e-22 Identities = 201/284 (71%), Gaps = 9/284 (3%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||||| ||||| || || ||||||| || | || || || || |||||||| Sbjct 1009 GCCGTTGTCACTGTTCCCGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 950 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | | | ||||| ||||| || |||| | | || |||| || || || ||||| || | Sbjct 949 GGTACCATTGCCGGTCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACCGCGGCCGCTCT 891 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAA----ATGT-ATTGATCTTTGAT 195883 || || |||||||||||||| | ||| |||| || | | |||| ||| ||| Sbjct 890 GGCCTACGGTCTGGACAAGAAGGATGAC-AAGACTGAACGCCAGATCATTG-TCTACGAT 833 Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943 || ||||||||||| || ||||| || |||| | | | || | || | ||||| || Sbjct 832 CTTGGTGGTGGTACTTTCGATGTTTCCATTCTTACTGTCGACGAGGGCGTTTTCGAGGTC 773 Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||||| |||||||| ||||| || |||||||| || || || Sbjct 772 CAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 729 >seq3883 Length=97699 Score = 89.7 bits (98), Expect = 7e-13 Identities = 218/328 (66%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || |||| | | || || | ||| || | || || || ||| Sbjct 60825 AAGATGAAGGAGACCGCCGAGTCTTACCTTGGCAAGAATGTCAAGAACGCCGTCGTCACT 60884 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || ||||| || | | || | Sbjct 60885 GTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCAGATCTCT 60944 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || ||| || | || |||| || || || || || || | || || ||||| Sbjct 60945 GGCCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACGGCTGCCGCTCTCGCCTACGGTCT 61003 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || ||| | ||||| | | || ||| |||||| ||||||||||| || Sbjct 61004 TGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTATGATCTTGGTGGTGGTACTTT 61057 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| | || |||| | || | || | ||||| || ||| | || ||||| Sbjct 61058 CGATATTTCCATTCTTGAGATCCAGAACGGCGTCTTCGAGGTCAAGTCCACCAACGGTGA 61117 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| || ||||| || || |||||| Sbjct 61118 CACTCACCTCGGTGGCGAGGACTTCGAT 61145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657828487193280