Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1456 105 4e-18
seq3796 93.3 3e-14
>seq1456
Length=54918
Score = 105 bits (116), Expect = 4e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||||||||||||| ||||| ||||| || || |||| | ||
Sbjct 54901 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCC 54842
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| ||||| || |||||||| | || | |||||||||||
Sbjct 54841 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 54782
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | | |||||| || | ||| ||||||
Sbjct 54781 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTC 54722
Query 34946 TTTCCCGT 34953
|| || ||
Sbjct 54721 TTGCCAGT 54714
>seq3796
Length=68498
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 32801 AGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 32742
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 32741 TCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 32683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325676430272756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |