Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3624 260 1e-64
seq4009 172 5e-38
seq1456 113 4e-20
seq3796 91.5 1e-13
>seq3624
Length=35007
Score = 260 bits (288), Expect = 1e-64
Identities = 1026/1591 (64%), Gaps = 47/1591 (3%)
Strand=Plus/Minus
Query 147939 GCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAG 147998
||||||| || ||||| || ||||||||||| ||||||||||| | ||| | |
Sbjct 25672 GCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCG 25613
Query 147999 TCGTGCACCGACGACATGAGCGTGTACGTCG---GGTGCGGCACAAACAGATTAAACGAC 148055
||||| ||| | ||| | || | ||| ||| | || | ||| | |||
Sbjct 25612 AAGTGCATCGAGG---TGATCTTGCCCATCGTGGGGTCCTTCATGTGGATATTGAGGGAC 25556
Query 148056 TGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTTATC 148112
|| || || |||||||| |||||||| |||||||| | || || || ||||
Sbjct 25555 TGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGATGGTGCGCTGGGAA 25496
Query 148113 TTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGC 148172
| ||||||| | |||||||| ||| |||||| | ||| || ||| | ||| ||
Sbjct 25495 ---AGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGATGTTGGGGATCTGC 25439
Query 148173 TGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGC 148232
|| | |||||| | |||| || | || ||| | || | | || |||
Sbjct 25438 TGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAGACCACAGTCCGAGG 25379
Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292
|| | ||||| | | || || | || || ||||| || || |||||||| || ||
Sbjct 25378 TCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCACCGGCGAGGACACGG 25319
Query 148293 CGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351
|| ||| || | ||| ||| | || || || |||| ||| ||| | ||||||
Sbjct 25318 CG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGAAGCCGAGAATCTGGCT 25260
Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411
||||| || |||||||| || || |||| |||||||| |||| | | ||
Sbjct 25259 GGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGTACCGTGCTGGGCAAT 25200
Query 148412 TTTGCGCTTCAGAGCCG-CCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACATGTC 148468
| | ||||| ||| | ||||||||||||| ||| | ||| | | |||||||||||
Sbjct 25199 CTCGGCCTTCA-AGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTTA--TTCCACATGTC 25143
Query 148469 GTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528
|| |||||||| || || || |||||||||| | ||| ||| || |||| |
Sbjct 25142 ATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTAAGGGCCGTCCCT 25083
Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588
| || || || || ||| || ||| ||| || |||||| ||||| |
Sbjct 25082 CTTGGCGAGCTCAACCGAGGCAGTGAGAGCAGCGTGGTAGATAGTCTCGAAGATTTGAAT 25023
Query 148589 GTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGC 148648
||| ||| || ||| ||| |||||||||| || | || ||||| ||
Sbjct 25022 GTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGCAAGGAAAGCGTCAGC 24963
Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708
||| || | || || || | || || ||||| |||||| | || |||
Sbjct 24962 AAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCTCTTCCTGGCT-TCTG 24904
Query 148709 GAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAA 148767
|| | || |||||||| ||| |||||||||| ||||| || | ||||| ||||
Sbjct 24903 GAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGACAAGCACCTGAGTAA 24844
Query 148768 TTCTGCGCAGCAATTCAAAATCGTA---------CTTGTCATCTACGATGCATCGGTTCA 148818
| | ||| | || ||||| || | |||| |||| | | ||| |
Sbjct 24843 CCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTCCTCGACATCGACGAAGG-TGGGT--A 24787
Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878
|| | ||| |||| |||||||| || ||||| || ||| ||||||| ||||| |
Sbjct 24786 GCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTT 24727
Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938
|| |||||| ||| || || ||| | |||||| || |||||||||| |||||
Sbjct 24726 CGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGC 24667
Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995
| ||||||||||| |||| | || || ||||| ||||| | || | || |
Sbjct 24666 AGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGCGT 24607
Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCG-TAGCGACCCTCCTGCTCGTATAAA 149054
||| || | ||| || || || || | || |||||||||| ||| ||
Sbjct 24606 ACC---AGAGCTTCTGAGCACGGACAGTCT-CGCGACCACGACCCTCCTTCTCATACTGC 24551
Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114
|| || |||||| |||| || ||| ||| | ||||| ||||||| || |||
Sbjct 24550 TCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGG 24491
Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174
|||||||| | ||| ||||| | | || |||||||| || |||||||| | ||||
Sbjct 24490 CACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAG 24431
Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG 149234
|| ||||| | ||||| || || || || || ||| || |||| |
Sbjct 24430 AGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCG 24371
Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294
|| | |||||| | || || ||||||||||| | ||| | |||| || || ||||
Sbjct 24370 AGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGC 24311
Query 149295 TTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351
||| || |||||||| |||| ||| | ||||||| |||| || | ||||||
Sbjct 24310 TTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCATAGGGATG 24251
Query 149352 ATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGC 149411
| ||| || |||||||||||| | |||| ||||| || || | |||
Sbjct 24250 AGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATGCGGTGA 24191
Query 149412 ACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGA 149470
||||| | ||||| || ||| || ||| ||||| || || ||| | || ||
Sbjct 24190 ACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCTTC-AGGGTGTC 24132
Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATG 149501
|||||| ||||| ||||| || |||||||
Sbjct 24131 GTAGATACCCTCAATGCTATCCTCCTTCATG 24101
>seq4009
Length=43835
Score = 172 bits (190), Expect = 5e-38
Identities = 346/505 (69%), Gaps = 11/505 (2%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || || ||||| ||||| || ||||| || ||||| | | ||| ||||| |
Sbjct 33971 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 33912
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| ||| ||| |||| ||| | ||||| | || |||||
Sbjct 33911 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAG 33852
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529
||||| || || ||||| ||||||| ||||||| || | |||||||||||| || | |
Sbjct 33851 GCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGT-CGCGTTCATGCCAAGAAGAG 33793
Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGA--ACAT 120587
| || || | || ||||| ||||||||||| || || || ||||| ||| | |
Sbjct 33792 CGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATCT 33733
Query 120588 GGCGAGCATAGT-GTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646
| | | | | ||| |||| || | || |||| ||| | | |||||| |
Sbjct 33732 TCTCAACGGATTCGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCAGG 33679
Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706
| ||||| || |||| |||||| ||||| || || ||||| ||| || |||| || |
Sbjct 33678 CGAAGTCGGTATGCATGCCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAG 33619
Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766
|||||| ||| | |||||| |||| |||| ||| || ||| ||||| | |
Sbjct 33618 GCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATAC 33559
Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCC 120826
|||| ||| || || || | | |||| || || |||| ||||| | |||||
Sbjct 33558 CCTCGACGGCCGCGAAAGCAATGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCC 33499
Query 120827 ACTTCATGGCCCACTCGGCCTTTTT 120851
| | |||||| |||||||| ||
Sbjct 33498 AACGAAGGGCCCAGTCGGCCTTCTT 33474
>seq1456
Length=54918
Score = 113 bits (124), Expect = 4e-20
Identities = 127/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528
||| ||||| || ||||| ||| || ||| |||||||||||||||||| ||| |
Sbjct 54881 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 54822
Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588
||| || ||||||||||| || || ||||| |||||||| |||||| ||||| |
Sbjct 54821 AATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 54762
Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | |||||| | | ||| || |||| ||||| ||| ||||| ||||
Sbjct 54761 GTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 54712
Score = 111 bits (122), Expect = 2e-19
Identities = 131/175 (75%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||| |||| | ||| | | | ||||| ||||||||||
Sbjct 54604 GGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCA-TCCTCAAGCTGCTTGC 54546
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| |||||||| || || || |||||||||||||| |||||| ||
Sbjct 54545 CAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCT 54486
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | || | ||||| | | ||| || |||| ||||| ||| ||||||||
Sbjct 54485 TGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 54431
>seq3796
Length=68498
Score = 91.5 bits (100), Expect = 1e-13
Identities = 87/109 (80%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||| ||| || ||| | | | ||||||||||||||||
Sbjct 32787 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCGAGCTGCTTGC 32729
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570
||||| | || || ||||||||||| || || ||||| |||||||| ||
Sbjct 32728 CCGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGT 32680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483395879657760
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