Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3624 143 3e-29
seq3865 95.1 1e-14
>seq3624
Length=35007
Score = 143 bits (158), Expect = 3e-29
Identities = 1041/1661 (63%), Gaps = 37/1661 (2%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 25689 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 25630
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| ||||||| || | ||||| |||| | |||| | || || | ||||
Sbjct 25629 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 25570
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| || | || |||||||||||||| || || || || ||||| | || |
Sbjct 25569 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 25510
Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
| | | || | | ||||| || ||| ||||||| ||| || ||||||||||
Sbjct 25509 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 25453
Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101
| | ||| | || || || || | | ||| | | |||||| | | |
Sbjct 25452 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 25393
Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 25392 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 25333
Query 118162 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220
| |||||| || | ||| ||||| || | || || ||||| || ||||||||| |
Sbjct 25332 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 25275
Query 118221 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279
|| ||| | ||||| | ||||| |||||||| || || | ||| | | ||| |||
Sbjct 25274 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 25215
Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCC 118338
||| | | ||| |||| | ||| ||||||||| || | | | |
Sbjct 25214 ACCGTGCTGGGCAATCTCGGCCTTCA-AGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCT 25156
Query 118339 CCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 118398
| |||||| ||| | || || || || |||||||| || |||| || || || |
Sbjct 25155 TATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGT 25096
Query 118399 ATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTG 118455
| ||||| || || || | || ||| || ||| || ||||| || || |
Sbjct 25095 AAGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAG 25039
Query 118456 TTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 118515
| || || || || |||| ||||||||| ||||| |||| | ||
Sbjct 25038 TCTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAG 24979
Query 118516 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 118575
|| || | || || ||||| | |||||| | | || || || || | ||| ||
Sbjct 24978 CAAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGC 24919
Query 118576 ACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634
||||| || ||| | | || || || | || || | | | || ||||| |||
Sbjct 24918 TCTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTG 24860
Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTC 118690
| |||| || | || |||||||| | | | || | | || | ||| |
Sbjct 24859 ACAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGAC 24804
Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750
|| ||| | | || || || | ||||| | || ||||||| | ||||| | |
Sbjct 24803 ATCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGC 24744
Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810
|||||||| | ||||| ||||| ||| || || ||||||||| | |||||| ||
Sbjct 24743 GGTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTG 24684
Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
|| ||| ||| || |||||||| | |||| | || | || || || ||
Sbjct 24683 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTG 24624
Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929
|| || ||| || || | ||||| | || | ||| | ||||| || | || ||||
Sbjct 24623 GGCCTCGAGGATCGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCGCGACCACGACCCT 24565
Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989
| | ||| |||| ||||||||| || || || ||||| | | || | || || |
Sbjct 24564 CCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAG 24505
Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049
| || | ||||| | ||| | ||| || || |||||| |||||||||||||
Sbjct 24504 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 24445
Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109
| || || |||||||| || |||| || || ||| |||| | || || | || || |
Sbjct 24444 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 24385
Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169
| ||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 24384 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 24325
Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226
| || || |||| |||||| || || | |||||| ||| | ||||
Sbjct 24324 AAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACAC 24265
Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATT 119284
| ||||| || |||| || | | ||| || || || ||| | || | |
Sbjct 24264 GGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAAT--GTAGCTGCCAGT 24207
Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344
||| | || ||| | || || ||| ||||| || || ||| ||||| || ||
Sbjct 24206 GGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACA 24147
Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404
| | || || ||||||| || || || || |||| | |||||||||||||
Sbjct 24146 GGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCA 24087
Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445
| || |||||| |||| |||||||| ||||| ||||
Sbjct 24086 AGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAGAG 24046
>seq3865
Length=68630
Score = 95.1 bits (104), Expect = 1e-14
Identities = 165/235 (70%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT-TGATTTTCACGGGCAAC 14292
|| |||| || || |||||||||||||||| || || || || | ||| || ||
Sbjct 2525 TTGCCGATAGCATCGATTTCATCGATGAAAATAATGCAGGGGGTGCTCTTC-CGCGCTGT 2583
Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 14352
| | || | || || ||||| || ||||||||||| ||||||||||| || | ||
Sbjct 2584 TGCGAAAAGGTCACGGACTCTAGAGGGGCCGACACCCACGAACATCTCCACGAACTCGGA 2643
Query 14353 GGCG-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411
|| ||| | || ||| || || | ||||||||| || |||| ||||| | |
Sbjct 2644 ACCGCTAACGCT-GAAGAAAGGCACTTGAGATTCACCGGCAGTGGCCTTAGCGAGCAACG 2702
Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
|||| || || || || |||| ||||| ||||||||| ||||| |||||||
Sbjct 2703 TCTTACCGGTACCGGGAGGACCTGAGAGAATGGCACCACGCGGGATTTTGGCACC 2757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618403319665440
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