Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1457 131 1e-25
>seq1457
Length=54532
Score = 131 bits (144), Expect = 1e-25
Identities = 255/377 (68%), Gaps = 0/377 (0%)
Strand=Plus/Plus
Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141
|||||| || || |||||||| || ||| || ||||| |||| || ||||||
Sbjct 11959 GTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGAT 12018
Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201
||| | || | || |||||| | | ||| | | | |||||||||||| ||
Sbjct 12019 GCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCCACACC 12078
Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261
||| |||||| | | || |||| |||||| || ||||| |||| |||||||||
Sbjct 12079 TTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCACTGGAA 12138
Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321
||||| || || || ||||| ||||| || | |||| || ||| |||| | ||
Sbjct 12139 GCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAGGAA 12198
Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTT 30381
|| | || ||||| | ||||||||||| || || ||| ||||| || ||
Sbjct 12199 CTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGAGAGAGGCTTCGATGA 12258
Query 30382 TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTT 30441
|||| ||| ||| |||||||| || || | | |||||| | ||||| | |||
Sbjct 12259 TGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGCGCGCAGGAAGACGCGCTT 12318
Query 30442 GGTCGTGAGGAGGGGAA 30458
||| |||||||| ||||
Sbjct 12319 GGTGGTGAGGAGCGGAA 12335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406289978331408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |