Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1456 132 1e-25
seq4009 111 3e-19
seq3796 105 1e-17
>seq1456
Length=54918
Score = 132 bits (146), Expect = 1e-25
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || ||||||||||||||
Sbjct 54634 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 54575
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || || ||||| | || || || || ||
Sbjct 54574 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 54515
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || |||||||| |||||| ||||| || ||| | ||||| |||||||| | ||||
Sbjct 54514 AATGCCTTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGA 54456
Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075
| ||||| ||||| ||||| || ||
Sbjct 54455 CCTCGAGGGTGATGGTCTTGCCGGT 54431
Score = 132 bits (146), Expect = 1e-25
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || || || | ||||| || || |||||||||||||| |
Sbjct 54917 ACCGCCGCGGAGACGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 54858
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| || |||| || || ||||| ||
Sbjct 54857 CAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGG 54798
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| ||||||||||| |||||| ||||| || ||| | ||||| ||||| | ||||
Sbjct 54797 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGA 54739
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077
| ||||| ||||| ||||| || ||||
Sbjct 54738 CCTCGAGGGTGATGGTCTTGCCAGTCA 54712
>seq4009
Length=43835
Score = 111 bits (122), Expect = 3e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246
|| ||||||||| | |||||| |||| | |||| | |||||||| || ||||
Sbjct 33759 GAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGCATGAACGCGACTCTC 33818
Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306
||| | || || ||||| ||||| ||||| || | | |||||||| || || ||||
Sbjct 33819 ATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGCGCTGGGCAACAAGAAG 33878
Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366
|| ||||| | |||||||||| || |||||| ||| || ||| | || || ||
Sbjct 33879 TACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACG 33938
Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||||||| ||||| || | || || || | | | |||||
Sbjct 33939 AACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAAGGCGGGTGT 33982
>seq3796
Length=68498
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || |||||||||||||| |
Sbjct 32817 ACCACCACGCAGGCGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 32758
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 32757 CAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 32698
Query 282992 AATACCCTCCTTGTCT 283007
||| ||||||||||||
Sbjct 32697 AATGCCCTCCTTGTCT 32682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046683891609096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |