Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq12 116 4e-21 >seq12 Length=176190 Score = 116 bits (128), Expect = 4e-21 Identities = 384/595 (65%), Gaps = 8/595 (1%) Strand=Plus/Minus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || || || |||| || ||||| | || |||||| |||| | || || || ||||| Sbjct 140138 CCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATG 140079 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || ||||| || ||||| | ||| | || || || | | | || || || || Sbjct 140078 AAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCG 140019 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 ||||| || || || ||| | | | ||| | |||||| || || | |||||| Sbjct 140018 TGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATG 139959 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | || || || ||||| || ||||| || | ||| || || || || || | Sbjct 139958 GCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAG 139899 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | || ||| ||||| || || ||||| | ||| || || |||| ||| ||| || Sbjct 139898 ACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCG 139839 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 ||||||| || || || || || || || ||||| || ||||| | ||| Sbjct 139838 GTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCG 139779 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 || || | ||| || ||||||||||| || || |||||| |||||| | || || Sbjct 139778 CAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAG 139719 Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460 ||| || | ||| | || || || || || | ||| || |||||||| || Sbjct 139718 CAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTG 139659 Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTA---TATC-CCATTG 54516 || | || || | || ||||| ||||| || || || | | || || | Sbjct 139658 AAGAACTTGCTCGACATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCCCAG 139599 Query 54517 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571 ||| || || || || ||||| | ||||||||| || | || ||||||||| Sbjct 139598 ATG----CCGACGGCAACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTG 139548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593715633097920