Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq183 163 3e-35 >seq183 Length=69340 Score = 163 bits (180), Expect = 3e-35 Identities = 246/350 (70%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | |||||| ||||| || |||| ||||||||| || ||| Sbjct 63296 ACGTAGAACTGGGCAAACATGTGGCATGGCGGAAGCACCATCTTGGGCAGGTCGGCTGGG 63237 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||| || | ||||||||||| || | ||||||| |||||| || | | Sbjct 63236 TTCCACGCCGAGAGGACGAGCCGCCGGTCGAAGGGGTTCGTCTTGAGGGTGTGGATGATG 63177 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 | |||||||| |||||||| ||| ||| || ||||||| ||| ||||| | || Sbjct 63176 CGCGCCAGCTGGTCGACGCCCTGGCCCGAGTAGTCCGTCTTGGCGTCGACGTAGTCAGCG 63117 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 || ||||| | ||||||||| ||||||||||| ||||| ||||| | ||| | | | Sbjct 63116 CCAAAGTGTCGCCACTGGAAGCCGTAGACGGGGCCCAGATCCCCCGTCTCGCGCGACGTC 63057 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC 146169 || ||| | ||||||| || || || |||||| | ||||||||||| || || Sbjct 63056 AGTCCGAGGTTGTCGAGGAACTCGCGTGAGCCGTTGCCATCCCAGATCTTCACCCCTTGG 62997 Query 146170 GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 | ||| ||| | ||| ||| ||| ||||||||||| ||||| Sbjct 62996 GAGGACAGCGACTGCGAGGAGGTGTCGCCCGATATGAACCAGAGGAGCTC 62947 Score = 123 bits (136), Expect = 3e-23 Identities = 148/196 (76%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 145659 GGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGT 145717 ||||||| || | ||||| || |||| | || ||||| |||||||| || |||| Sbjct 63616 GGGGCTCGCGGCCCAGCTGCGTCTCGAGGGCGGCGACATGGTTCAGGTAGACATGGGCGT 63557 Query 145718 CCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTG-AGGTGGGCGACCATGTA 145775 | |||| |||||| | | | | |||||| | | |||| | ||| || ||||||| Sbjct 63556 CACCCATGACGTGCGTCAGGCTGCCCGGGACCAA--CCCGCACACGTGCGCCACCATGTG 63499 Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 |||||||| | ||||||||| |||||||| ||||| |||||||||||||| | || || Sbjct 63498 TGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGCCCCATGTCACAGGAACG 63439 Query 145836 CTGGTACAGCTGGCAG 145851 |||||||||||| ||| Sbjct 63438 CTGGTACAGCTGACAG 63423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590070869728160