Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq32 131 2e-25
seq177 125 7e-24
seq20 116 4e-21
>seq32
Length=147543
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || || || || |
Sbjct 71006 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTCG 71065
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||| ||| || | ||||| ||||||||||| | || ||
Sbjct 71066 GACACCATTGACAACG-TCAAATCAAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCA 71124
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || ||||||| ||||||||| ||| |||| |||| || ||||| |||||||||
Sbjct 71125 ACAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACAA 71184
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| ||| |||||
Sbjct 71185 CATCCAGAAGGAGAGCACTCTGCA 71208
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || |||||||| || || || || || |||| || ||| | |
Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || |||| ||||| ||||||||||| | || ||
Sbjct 71294 GACACAATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCA 71352
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||||||||| ||| |||| || | || || || ||||||||
Sbjct 71353 GCAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCTGACTACAA 71412
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| ||| ||||| | ||| ||||
Sbjct 71413 TATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCG 71448
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| || || ||||||||| |||| || ||| | |||| | | | | | |||||
Sbjct 70802 ACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGATACCATCGATAATGTCAAGTCG 70861
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| || || ||||| || || | |||||||| || || || | |||||||||
Sbjct 70862 AAGATTCAGGATAAGGAGGGTATTCCGCCTGACCAGCAGCGCCTGATTTTCGCGGGCAAG 70921
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | || |||||| || ||||| |||||||||||| | ||||| |||
Sbjct 70922 CAGCTCGAGGATGGTCGTACCCTCTCGGATTACAATATCCAGAAGGAGTCGACGCTCCAT 70981
Query 40894 CTAGT 40898
|| ||
Sbjct 70982 CTCGT 70986
>seq177
Length=70791
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||||||||| || |||||| | || || || | | |
Sbjct 29615 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29556
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| ||||||||||| | ||||||
Sbjct 29555 GACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 29496
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| ||||| || || | || || ||| |||||| |||
Sbjct 29495 CAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACTATAAC 29436
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| ||| || || || ||| | ||| || | || ||
Sbjct 29435 ATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGCCTGCGTGGTGG 29389
>seq20
Length=161045
Score = 116 bits (128), Expect = 4e-21
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
|||| || ||||| || || |||||||| || || |||||| |||| ||||| || | |
Sbjct 65655 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTCGAGTCCTCGG 65596
Query 40751 ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810
| | | | | | ||||| || || | ||||| |||||||||||| | |||||||
Sbjct 65595 ATACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGC 65536
Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870
| || || |||| || ||||| ||||| || |||| || |||||| ||||||||||
Sbjct 65535 AGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAACA 65476
Query 40871 TCCAGAAGG 40879
| || ||||
Sbjct 65475 TTCAAAAGG 65467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515214022047040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |