Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 116 8e-21 >seq4 Length=232548 Score = 116 bits (128), Expect = 8e-21 Identities = 263/395 (67%), Gaps = 18/395 (5%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || || ||| |||| ||| |||| || || || ||||||||||| || || ||||| ||| Sbjct 182466 CTCCCGCATATGCTCTTCTACGGACCCCCTGGCACAGGCAAGACTTCGACGATCCTCGCG 182407 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 | ||| | | ||| || ||||| | ||||||||| ||||| ||||| Sbjct 182406 TTAGCCAAGGAGTTATACGGCCCGGAACTCATGAAATCGCGCGTGCTGGAGCTTAACGCC 182347 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGT-- 254178 || || || ||||| | |||| ||||| ||| ||||| ||| || ||| Sbjct 182346 TCGGATGAGCGCGGCATCTCGATCGTGCGCGAAAAGGTCAAGGACTTCGCCCGAATGCAA 182287 Query 254179 ----CGATTTCGTC-----GTTCCAA--CCCGGC-----TGTCCGCCTTTCAAGCTCGTG 254222 | | || | | | || ||||| |||||||| |||||| || | Sbjct 182286 CTCACAAACCCGGCCCCGGGGTATAAGGCCCGGTACCCTTGTCCGCCCTTCAAGATCATC 182227 Query 254223 ATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATG 254282 ||||| |||||||| |||| ||||||| ||||| ||| |||||| || || || ||| Sbjct 182226 ATCCTCGACGAGGCCGACAGCATGACGCAGGACGCACAGAGCGCCCTGCGGCGCACCATG 182167 Query 254283 GAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATC 254342 |||||| || | | ||||| || ||||| | ||||||||||| | || ||| Sbjct 182166 GAGACGTACAGCAAGATCACGCGGTTCTGCCTCATCTGCAACTACGTCACCCGCATAATC 182107 Query 254343 GCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 | ||||||||| || ||| |||||| || || Sbjct 182106 GACCCGCTGGCCAGCCGCTGCAGCAAGTTCCGCTT 182072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073755338863872