Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq32 140 3e-28
seq177 113 4e-20
>seq32
Length=147543
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| |||||||||||||| |||||||||||| ||| ||| |||| |||
Sbjct 71214 ACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCC 71155
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || ||||| || | |||||||| || || || | ||||||||||||
Sbjct 71154 AACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGG 71095
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| || || | | | ||||| ||||||||||| || |||||||||
Sbjct 71094 ATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCCAACGTGATCGTCTTG 71035
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||||||||| || || |||||||||
Sbjct 71034 CCAGTCAGAGTCTTGACGAAAATTTGCATG 71005
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| |||||||||||||| || |||||||| ||| ||| | || |||
Sbjct 71442 ACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGACAGAGTCCGACCATCCTCC 71383
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || ||||| || | ||||| || || || || | |||||||||||| |
Sbjct 71382 AACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGA 71323
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| | |||||||| | |||||||||||
Sbjct 71322 ATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACCTCGAGCGTAATCGTCTTT 71263
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || || || |||||
Sbjct 71262 CCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
>seq177
Length=70791
Score = 113 bits (124), Expect = 4e-20
Identities = 153/212 (72%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| ||||| |||||| || || | || || || ||
Sbjct 29412 GTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTCCGGCCATCCTCGAGCTG 29471
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| ||||| || || | ||||| |||||||| || | |||||||||||| || ||
Sbjct 29472 CTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 29531
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| || |||||||||||
Sbjct 29532 AGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGT 29591
Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343
|| |||||||| ||||| |||||| ||||||
Sbjct 29592 GAGGGTCTTCACGAAGATCTGCATGATTGCCT 29623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395071328756884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |