Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq12 448 4e-121 seq32 125 6e-24 seq177 96.9 3e-15 >seq12 Length=176190 Score = 448 bits (496), Expect = 4e-121 Identities = 1227/1856 (66%), Gaps = 52/1856 (3%) Strand=Plus/Minus Query 22144 GGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGA 22203 |||||| || || |||||||||||||| ||||||| |||||| || || || || Sbjct 141291 GGTGCGGAGGTAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCGGTGAAGTGCATGCT 141232 Query 22204 CGTCAATTTTCCATAACTCGG--CAAGTCCATGTACACATTGAACGACTGACTCTGATCG 22261 || | || || |||| || | ||||| | |||| |||||| ||| ||| Sbjct 141231 GGTGATCTTGCCCATGGTCGGTTCACG--CATGTGGATGTTGAGCGACTGGGACTGGTCG 141174 Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACG 22321 || || ||||| || ||||| ||||| | | | |||||| || |||||||| || Sbjct 141173 ATGAAGGCTCCACGGTCGGCCGCCATCTGGACGACGGTACGCTGTGAAATTTCCCAGACT 141114 Query 22322 GTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTT 22380 |||||||| ||| | |||| || || || | | || | |||| | || ||| Sbjct 141113 GTCTTGTAGAGTGCCTTGATATCGGCTGGGAT-GTTGGGAATGTTCTGAATCGAACCGCC 141055 Query 22381 ATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTT 22440 | | ||||| ||| || || | || ||||| ||| || || | || || Sbjct 141054 TTCGGCGATGATGCGATTCTTCATGTTGTCCGACCACAGACCCATATCGACGAGGTCCTT 140995 Query 22441 GACCAGATGAC---GGTTCACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAA 22496 |||| | | |||| || ||||| |||||||||| |||| || || || ||||||| Sbjct 140994 ---CAGAAGCCAGGGGTTGACGACTTGGAACTCGCCGG-CAAGCACACGTCGCTGGTAAA 140939 Query 22497 TGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGG 22556 | ||||| ||| | || ||||| |||| ||||| |||| ||||| | ||| || || | Sbjct 140938 TATTGGACGTGTAAGGCTCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAG 140879 Query 22557 TCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTT 22614 ||||||| || || | ||| || ||| | | ||| |||| |||| || || Sbjct 140878 TCGGCATGGGAGCGAGCAGCAGACTGTTCCGGACGCCATGCTCCTTGATCTTGGCCTTGA 140819 Query 22615 GAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA- 22673 |||| || ||| |||||||| || |||| | || || |||||| ||||| || | Sbjct 140818 GAGCGTC--CCAATCCCACAGGCTGGTCGGCTTGACGTT---CCACATGTCGTACTGGAG 140764 Query 22674 -ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCA 22732 | || | | || | | | | |||||||| || |||||| || | | ||| Sbjct 140763 GATACCCTGGGAGACAG-GAGAT-CCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCG 140706 Query 22733 AGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAAT 22792 || ||||| ||| |||||| | | || || || |||||||| | |||||||| Sbjct 140705 AGGTCGCACGAAGCCGTCAACGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGC 140646 Query 22793 TC---GGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATA 22849 || ||| ||| || || || | ||||| || | | || ||| || ||||| | | Sbjct 140645 TCACGGGCCTCGG-GAGACT--CGAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGA 140589 Query 22850 CCCTGAACGCCTATACCGATCGGTCGGT------TTTTCAGATTCGACACTTTTGCCTCG 22903 ||||||||||| | ||||| || |||| | || ||| || | ||||| Sbjct 140588 CCCTGAACGCCGACGCCGATGGGGCGGTGGCGCGTGTTGCTATT-GAAA-----GCCTCC 140535 Query 22904 GGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTT 22963 | || || || ||||| | |||||| || | | || | | || Sbjct 140534 TTGACCGGGTAGTGGTTGACGTCGATGATCTTGTTCAGATTGCGGACGACCACCTGAGTG 140475 Query 22964 ATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC--CGATTGTA--CAACAAACTTGTTGAC 23019 | | || ||||| || || || ||||| | || |||| | || Sbjct 140474 ACCTCATGCAGCTTCTGGAAATCGTAGACACCTTCG-TTGTAATCCACGAACT-GAGGAA 140417 Query 23020 G-GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTT 23078 | || | ||||| | ||||| ||||| ||||| || | | |||||| | |||| Sbjct 140416 GTGCCAAGGAGGCCAAGTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTT 140357 Query 23079 CGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGC 23138 | || || || ||| | || ||||||| || |||||||||| || || |||| Sbjct 140356 CAGTGCAGAGGTTGGAGCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGC 140297 Query 23139 ACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC 23198 | |||||||||||||||| | || |||| |||||| ||| | ||||| ||| || Sbjct 140296 AATGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCAT 140237 Query 23199 GCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGG 23257 ||| | |||| || | || |||| ||| | | | | || | ||||||||| | | Sbjct 140236 ACCATAGCTTCTGGGCCTTGAC-CGTCTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCG 140178 Query 23258 TACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACAC 23317 || | || ||||| || | ||||| |||||||| || ||||| | | | || ||| Sbjct 140177 TATAGAGCCTCAAACTCTTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCAC 140118 Query 23318 ATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGA 23377 ||||| ||||| || || |||||||| |||| ||||||||||| ||||| | | Sbjct 140117 ATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAA 140058 Query 23378 GCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAA 23437 || ||| || ||||| || |||||||| || || ||| |||||| | |||| | Sbjct 140057 GCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGA 139998 Query 23438 AAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTA 23497 || || || || || |||||||| ||||| || || | |||||| ||||| || | ||| Sbjct 139997 AACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTG 139938 Query 23498 TTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGA 23557 ||||||||||| |||||||| | |||||| |||||| | || | ||||| || | || Sbjct 139937 TTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATG 139878 Query 23558 CCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACG 23617 |||||||| | ||| | ||| || | || || | || || | | ||| | | Sbjct 139877 CCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATG 139818 Query 23618 TGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAG 23677 | | || ||||| ||| || || || ||||| ||||| || || ||||||||| Sbjct 139817 TTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAG 139758 Query 23678 ATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTG 23737 ||||||||||||||||| || || | |||||| ||| || || || | || || | | Sbjct 139757 ATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGG 139698 Query 23738 GGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGA 23797 || ||| |||| ||| || ||||| ||||| || ||| | ||||||| || Sbjct 139697 GGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGG 139638 Query 23798 TTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATC 23857 ||||| || || ||| | || | || ||||| || |||| ||| |||||||| Sbjct 139637 TTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCCCAGATGCCGACGGCAACGCGCATG 139578 Query 23858 ATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGC 23917 ||||||| || || | |||||| | ||| | | || | ||||| || || | Sbjct 139577 ATCATGTGCTGTGGACGCTCGACGATCTTGCCATCGAGCTTCAGGAGATACGACCGCTCA 139518 Query 23918 ATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | ||| || || ||||| || | ||||| ||||| ||||| | || |||||||| Sbjct 139517 AGCGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGATCATATACGATGGCCGA 139462 >seq32 Length=147543 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||||||||| ||||| |||||||| | || || || | || Sbjct 71005 CATGCAAATTTTCGTCAAGACTCTGACTGGCAAGACGATCACGTTGGAGGTGGAGTCCTC 71064 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| | || | |||||| || || || ||||||||| ||| | ||||| || | Sbjct 71065 GGACACCATTGACAACGTCAAATCAAAG-ATCCAGGACAAGGAGGGCATCCCGCCTGATC 71123 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | |||||||| || ||||| ||||| |||||||| ||| | ||| || ||| || | Sbjct 71124 AACAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGGACCCTGTCCGACTACA 71183 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || || || ||||| || |||| || | ||| | || |||| Sbjct 71184 ACATCCAGAAGGAGAGCACTCTGCACTTGGTTCTCCGTCTGCGTGGTGGTA 71234 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || ||||| || ||||| || |||| || ||| | || Sbjct 71234 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATTACGCTCGAGGTGGAATCTTCG 71293 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| ||| | ||||| || ||| Sbjct 71294 GACACAATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGATCAG 71353 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||| ||||| |||||||| || Sbjct 71354 CAGCGTCTCATCTTCGCGGGCAAGCAGTTGGAGGA 71388 >seq177 Length=70791 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| ||||| || || ||||| || |||||| | || || || Sbjct 29620 CAATCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGT 29561 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 || ||||| |||| | ||||| | || ||||||||| ||| | ||||||| Sbjct 29560 CGAGCGACACCATCGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGCATCCCGCCCG 29501 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| ||||| || || ||||| ||| | || || |||| | ||| | Sbjct 29500 ACCAGCAGCGCCTAATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCTCCGACT 29441 Query 31368 ATAACATTCAAAAAGA 31383 ||||||| || || || Sbjct 29440 ATAACATCCAGAAGGA 29425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761920047680