Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq12 134 2e-26 >seq12 Length=176190 Score = 134 bits (148), Expect = 2e-26 Identities = 620/972 (64%), Gaps = 20/972 (2%) Strand=Plus/Minus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||| || || ||||| ||||||| | | | | || | || |||||||||||| Sbjct 140408 GAGGCCAAGTTGCAGACGGCAACCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAG 140349 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 ||||| | ||| || || | || | || || ||||| ||| || |||| Sbjct 140348 AGGTTGGAGCTGCGAATTGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCC 140289 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || || || ||||| || | ||||| || |||||| || | || || | ||| | | Sbjct 140288 TTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCATA-G 140230 Query 79801 ACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTTTC--GTA-TTGT-GTATAT 79854 || | ||||| | | |||| || | | ||| ||| ||| || | ||||| Sbjct 140229 CTTCTGGGCCTTGACCGT---CTTGCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAG 140173 Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914 | | || ||||| || || | ||| | | || || || || | || ||||| Sbjct 140172 AGCC--TCAAACTCTTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCATTGGGGCACATG 140115 Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974 | || |||||| || | | || || || ||||| || ||||| || ||||| | ||| Sbjct 140114 AGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATGAAAAGATCCGGGATCCACAAAGCA 140055 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 | || || || | | | ||| || || || ||||| || || || ||| Sbjct 140054 AGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCGTGGTTCTTCCGGAGGTCCAGAAAC 139995 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | | ||| | |||||| || || | |||||||| | | || || || ||||| Sbjct 139994 TCGAAGACATCGGCATGCCAAGGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTG 139935 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || ||||| || | ||| || || || || || | || | || ||| ||||| || || Sbjct 139934 CCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCG 139875 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 ||||| ||||| || || |||| ||| ||| || ||||||| || || Sbjct 139874 TTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTC 139815 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 || || || || || ||||| || ||||| | ||||| || | ||| || |||||| Sbjct 139814 AGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGCGTGTCGTAGATG 139755 Query 80275 CCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 80334 ||||| ||||| ||||| |||||| | || || ||| || | ||| | Sbjct 139754 CCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAGGACGAGAGCTGGGCCTGGGGT 139695 Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || || || || || | ||| || |||||||| || || | || |||| || ||| Sbjct 139694 GTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTGAAGAACTTGCTCGACATGAGGTTG 139635 Query 80395 TACGTCTCAATAGCTGATTCTA---TATC-CCATTGATGAATTCCTACCGCGACACGCAT 80450 || |||||||| || || | | || || |||| || || || || ||||| Sbjct 139634 TATGTCTCAATGACTCGCTCGACGTTGTCTCCCCAGATG----CCGACGGCAACGCGCAT 139579 Query 80451 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTC 80510 | ||||||||| || | || ||||||||| || | |||| | || || || Sbjct 139578 GATCATGTGCTGTGGACGCTCGACGATCTTGCCATCGAGCTTCAGGAGATACGACCGCTC 139519 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 | || || || ||||| || | ||| ||||| || || || | || |||||| Sbjct 139518 AAGCGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGATCATATACGATGGCCGAGTC 139459 Query 80571 GAGTTTATCCTT 80582 ||| | ||||| Sbjct 139458 GAGCTCTTCCTT 139447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261581398560