Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 1e-23
>seq12
Length=176190
Score = 125 bits (138), Expect = 1e-23
Identities = 386/595 (65%), Gaps = 8/595 (1%)
Strand=Plus/Minus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
|| || || ||||| || ||||| | | |||||| || | | | || || |||||
Sbjct 140138 CCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATG 140079
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|| ||||| || ||||| | ||| | || || || | | | ||| || || ||
Sbjct 140078 AAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCG 140019
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
||||| || || || ||| | | | ||| | |||||| || || | ||||||
Sbjct 140018 TGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATG 139959
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | || || || ||||| || ||||| || | ||| || || || || || |
Sbjct 139958 GCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAG 139899
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273
|| | || ||| ||||| || || ||||| | ||| || || |||| ||| ||| ||
Sbjct 139898 ACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCG 139839
Query 72274 CTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333
||||||| || | || || || || || || ||||| || ||||| | |||
Sbjct 139838 GTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCG 139779
Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393
|| || | ||| || ||||||||||| || || |||||| |||||| | || ||
Sbjct 139778 CAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAG 139719
Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 72453
||| || | ||| | || || || || || | ||| || |||||||| ||
Sbjct 139718 CAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTG 139659
Query 72454 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTA---TATC-CCATTG 72509
|| | || |||| || ||||| |||||||| || || | | || || |
Sbjct 139658 AAGAACTTGCTCGACATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCCCAG 139599
Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
||| || || || || ||||| | ||| ||||| || | || |||||||||
Sbjct 139598 ATG----CCGACGGCAACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTG 139548
Score = 84.2 bits (92), Expect = 3e-11
Identities = 193/290 (67%), Gaps = 3/290 (1%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| ||||| || || || ||| || | || || || ||||||||||| || || |||
Sbjct 141320 GTGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGA 141261
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920
|| | |||| ||| || ||||| || || | ||| | | || || |||
Sbjct 141260 CCCAACTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATGGTCGGTTCACGCATG 141201
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
|| || || | |||||| || |||||||||||||| | ||| || ||||| | | |
Sbjct 141200 TGGATGTTGAGCGACTGGGACTGGTCGATGAAGGCTCCACGGTCGGCCGCCATCTGGACG 141141
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040
| || |||| ||||||||| | || || || | | ||| ||||| |||| | |
Sbjct 141140 ACGGTACGCTGTGAAATTTCCCAGACTGTCTTGTAGAGTGCCTTGATATCGGCTGGGATG 141081
Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087
|| | | |||||||| || || || || || || || | ||| || ||
Sbjct 141080 TTGGGAATGTTCTGAATCGAACCGCCTTCGGCGATGATGCGATTCTTCAT 141031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671132455051040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |