Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq12 125 1e-23 >seq12 Length=176190 Score = 125 bits (138), Expect = 1e-23 Identities = 386/595 (65%), Gaps = 8/595 (1%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 || || || ||||| || ||||| | | |||||| || | | | || || ||||| Sbjct 140138 CCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTCATG 140079 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || ||||| || ||||| | ||| | || || || | | | ||| || || || Sbjct 140078 AAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTACCG 140019 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| || || || ||| | | | ||| | |||||| || || | |||||| Sbjct 140018 TGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATATATG 139959 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | || || || ||||| || ||||| || | ||| || || || || || | Sbjct 139958 GCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTGAAG 139899 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | || ||| ||||| || || ||||| | ||| || || |||| ||| ||| || Sbjct 139898 ACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAGCCG 139839 Query 72274 CTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333 ||||||| || | || || || || || || ||||| || ||||| | ||| Sbjct 139838 GTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATGGCG 139779 Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393 || || | ||| || ||||||||||| || || |||||| |||||| | || || Sbjct 139778 CAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAG 139719 Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 72453 ||| || | ||| | || || || || || | ||| || |||||||| || Sbjct 139718 CAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGTGTG 139659 Query 72454 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTA---TATC-CCATTG 72509 || | || |||| || ||||| |||||||| || || | | || || | Sbjct 139658 AAGAACTTGCTCGACATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCCCAG 139599 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 ||| || || || || ||||| | ||| ||||| || | || ||||||||| Sbjct 139598 ATG----CCGACGGCAACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTG 139548 Score = 84.2 bits (92), Expect = 3e-11 Identities = 193/290 (67%), Gaps = 3/290 (1%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || ||||| || || || ||| || | || || || ||||||||||| || || ||| Sbjct 141320 GTGAACTGGATAGGTTGGGCTGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGA 141261 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || | |||| ||| || ||||| || || | ||| | | || || ||| Sbjct 141260 CCCAACTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATGGTCGGTTCACGCATG 141201 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || || | |||||| || |||||||||||||| | ||| || ||||| | | | Sbjct 141200 TGGATGTTGAGCGACTGGGACTGGTCGATGAAGGCTCCACGGTCGGCCGCCATCTGGACG 141141 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 | || |||| ||||||||| | || || || | | ||| ||||| |||| | | Sbjct 141140 ACGGTACGCTGTGAAATTTCCCAGACTGTCTTGTAGAGTGCCTTGATATCGGCTGGGATG 141081 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 || | | |||||||| || || || || || || || | ||| || || Sbjct 141080 TTGGGAATGTTCTGAATCGAACCGCCTTCGGCGATGATGCGATTCTTCAT 141031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132455051040