Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 156 6e-33 >seq12 Length=176190 Score = 156 bits (172), Expect = 6e-33 Identities = 319/465 (69%), Gaps = 12/465 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || || || ||||| | ||| | || | || |||||||| || || Sbjct 139927 CAGGGCGGCAACAAGCGTCCCGGCGCCTTTGCCATATATCTTGAGCCTTGGCATGCCGAT 139986 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || ||| | || | || || ||| || ||||||| || || | ||| Sbjct 139987 GTCTTCGAGTTTCTGGACCTCCGGAAGAACCACGGTAAGGAAGAGGTGCGTGCTCGCGAC 140046 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052 | || ||| | ||| | || ||| | |||||||||||||| || |||| | Sbjct 140047 CTCTTCCTTGCTTTGTGGATCCCGGATCTTTTCATGAAGCGCGTTGAGAAGAACGGGG-- 140104 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | |||| || ||||||||| | || |||||||| |||| |||| ||||||||| Sbjct 140105 -AGTGGACGCTCATGTGCCCCAATGAGTGCCCCGGTCTCGCCGACTGCTACGGCGAAGAG 140163 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGAT-ACGTGAGACGAGTCGATGC 97171 |||||||| ||| | |||||| | |||| ||| ||| ||||| ||| | || Sbjct 140164 TTTGAGGCTCTATACGAGAAGTACGAGAAGGAGGACCGCGGACGCAAGACG-GTCAAGGC 140222 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | |||||| | ||||||| |||||||| | || | ||| | Sbjct 140223 CC-AGAAGCTATGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGCAACCCCTTCATGC 140281 Query 97231 TCTACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 ||||||||||| | || || || || |||||||| || ||||||| || || Sbjct 140282 TCTACAAGGAT-CATTGCAACCGGAAGAGCAACCAGAAGAACCTGGGCACAATTCGCAGC 140340 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||||| || ||||| ||||| | |||||| | |||| || ||| Sbjct 140341 TCCAACCTCTGCACTGAAATCATCGAGTACTCTGCTCCCGATGAG 140385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051752355040