Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq32 111 4e-19
seq20 107 4e-18
>seq32
Length=147543
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| ||||| |||||||| ||||| | ||| || || | || || || || ||
Sbjct 71424 TCCTTCTGGATATTGTAGTCAGACAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAG 71365
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| |||||||| || || || || || ||||||||||| | || || ||
Sbjct 71364 ATGAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 71305
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || || ||| ||||| || ||||| ||||| || || || || || ||
Sbjct 71304 TCAATTGTGTCCGAAGATTCCACCTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACG 71245
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 71244 AAAATCTGCAT 71234
Score = 107 bits (118), Expect = 4e-18
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || || || ||||| ||||| || || || || || | ||| ||
Sbjct 70990 AAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATC 70931
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || || ||||| || | ||| || ||||| || || || || |||||
Sbjct 70930 CTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATC 70871
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| | || ||||| || | ||||||| | ||| ||||| || || || ||
Sbjct 70870 CTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGT 70811
Query 104527 CTTACCAGT 104535
||| || ||
Sbjct 70810 CTTTCCGGT 70802
Score = 100 bits (110), Expect = 7e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || | |||||| || | || || || || ||
Sbjct 71196 TCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAG 71137
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | |||||||||||| || || || || || ||||| ||||||| ||| || ||
Sbjct 71136 ATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTG 71077
Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | ||| || | ||| || ||||| | || || ||||| ||||| || || || ||
Sbjct 71076 TCAATGGTGTC-CGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGAC 71018
Query 104548 AAATATCTGCAT 104559
|| || |||||
Sbjct 71017 GAAAATTTGCAT 71006
>seq20
Length=161045
Score = 107 bits (118), Expect = 4e-18
Identities = 138/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
|| ||||| || |||||||| || || | ||||| || || || || || ||||| ||
Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| | ||| || || || || || || || || ||||| ||||| | || ||||| ||
Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588
Query 104492 ACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| |||||| | ||| || ||||| || || ||||||||||| || || || || || ||
Sbjct 65589 ATGGTATC-CGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAA 65647
Query 104551 TATCTGCA 104558
|||||||
Sbjct 65648 GATCTGCA 65655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151386539157232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |