Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq32 111 4e-19 seq20 107 4e-18 >seq32 Length=147543 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| ||||| |||||||| ||||| | ||| || || | || || || || || Sbjct 71424 TCCTTCTGGATATTGTAGTCAGACAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAG 71365 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| |||||||| || || || || || ||||||||||| | || || || Sbjct 71364 ATGAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 71305 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || || ||| ||||| || ||||| ||||| || || || || || || Sbjct 71304 TCAATTGTGTCCGAAGATTCCACCTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACG 71245 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 71244 AAAATCTGCAT 71234 Score = 107 bits (118), Expect = 4e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| ||||| || || || || || | ||| || Sbjct 70990 AAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCATC 70931 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || ||||| || | ||| || ||||| || || || || ||||| Sbjct 70930 CTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTATC 70871 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || ||||| || | ||||||| | ||| ||||| || || || || Sbjct 70870 CTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCACCTCGAGGGTGATGGT 70811 Query 104527 CTTACCAGT 104535 ||| || || Sbjct 70810 CTTTCCGGT 70802 Score = 100 bits (110), Expect = 7e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || | |||||| || | || || || || || Sbjct 71196 TCCTTCTGGATGTTGTAGTCGGACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAG 71137 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||||||||| || || || || || ||||| ||||||| ||| || || Sbjct 71136 ATGAGACGCTGTTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTG 71077 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||| || | ||| || ||||| | || || ||||| ||||| || || || || Sbjct 71076 TCAATGGTGTC-CGAGGACTCCACCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGAC 71018 Query 104548 AAATATCTGCAT 104559 || || ||||| Sbjct 71017 GAAAATTTGCAT 71006 >seq20 Length=161045 Score = 107 bits (118), Expect = 4e-18 Identities = 138/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 || ||||| || |||||||| || || | ||||| || || || || || ||||| || Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||| || || || || || || || || ||||| ||||| | || ||||| || Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588 Query 104492 ACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | |||||| | ||| || ||||| || || ||||||||||| || || || || || || Sbjct 65589 ATGGTATC-CGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAA 65647 Query 104551 TATCTGCA 104558 ||||||| Sbjct 65648 GATCTGCA 65655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151386539157232