Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq160 91.5 1e-13 >seq160 Length=75710 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 5332 CTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCAC 5391 ||| || |||| || || | ||| |||||||||||| | ||| ||| ||||| | Sbjct 8428 CTGTGCGATCCGATCCCCTTCCTTCACCTCAAAGTCGGCCTCGCCGTGGTTGAACAGTAG 8487 Query 5392 CACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTG 5451 |||| ||| ||| ||||||||| |||| || ||||| ||||| || |||||||| Sbjct 8488 CACCTTGACGGGGCCCCGGTAGTCTGCGTCAATGACGCCGGCGCCGGTATCAATAAAGTG 8547 Query 5452 TTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 ||| | ||||| || || || || || ||||| |||| Sbjct 8548 CTTGGCGGCAAGCCCAGAGCGGGGGGCGATGCGGCCGT 8585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447745900108480