Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq500 100 4e-17 >seq500 Length=18988 Score = 100 bits (110), Expect = 4e-17 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||| ||| || || |||||||| || ||||||||||| || | Sbjct 10089 CGCCAAGCGCCACCGCAAGAT-TCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 10031 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||| ||||||||||| ||||| || ||||||||| |||||| Sbjct 10030 TCCGCCGTCTGGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 9989 Score = 80.6 bits (88), Expect = 4e-11 Identities = 101/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| | ||| ||||||| || || |||| ||| | Sbjct 9928 TGATCTACGAGGAGACCCGTGGCGTTCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGACG 9869 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || ||||||||||| || || ||||||||||| || | || ||||||||| Sbjct 9868 CCGTCACGTACACCGAGCACGCCAAGCGCAAGACTGTCACGTCGCTCGACGTCGTCTATG 9809 Query 16656 CATTGAAACGTCAAGGCCG 16674 | | || ||||| ||||| Sbjct 9808 CCCTCAAGCGTCAGGGCCG 9790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074464897172