Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq12 154 1e-32 seq20 118 1e-21 seq177 98.7 9e-16 seq32 91.5 1e-13 >seq12 Length=176190 Score = 154 bits (170), Expect = 1e-32 Identities = 824/1296 (64%), Gaps = 33/1296 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || ||||||||||| | |||||| ||| || | || |||||| | || Sbjct 140981 TTGACGACTTGGAACTCGCCGGCAAGCACACGTCGCTGGTAAATATTGGACGTGTAAGGC 140922 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||||||| ||| || | ||| | || || |||||| || | | Sbjct 140921 TCGAAGCATTCGTTGTTGCCCAAGATCTGCGAGGTGGAGGCAGTCGGCATGGGAGCGAGC 140862 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || || || | ||| |||| |||||| | |||| || | ||||||||| Sbjct 140861 AGCAGACTG--TTCCGGACGCCATGCTCCTTGATCTTGGCCTTGAGAGCGTCCCAATCCC 140804 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || |||||| | |||| ||||||||||||||| | || |||| | | | || Sbjct 140803 ACAGGCTGGTCGGCTTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGAGACAGGAG 140744 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | ||| ||| |||||||| ||||| ||| | | Sbjct 140743 ATCCTTCGTATGTCGGGTACGGGCCTTGCTCCTTGGCGAGGTCGCACGAAGCCGTC--AA 140686 Query 145356 CGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 ||||| | || || || ||| || ||| |||| ||| || || ||| Sbjct 140685 CGCCGCATGGTAGATGGTTTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGAGACTC 140626 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | | ||||| || ||| | || ||||| ||||| ||||| | || ||||||||||| Sbjct 140625 GAAAGGCATCCGGAGCGCCAAGAAGGCATCCGCGAGACCCTGAACGCCGACGCCGATGGG 140566 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAAT 145533 || || | ||||||| | ||| || || || || | || |||||| || Sbjct 140565 GCGGTGGCGCGTGTTGCTATTGAAAGCCTCCTTGACCGGGTAGTGGTTGACGTCGATGAT 140506 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 || |||| || || || || |||| || | | ||| ||| | || || | Sbjct 140505 CTTGTTCAGATTGCGGACGACCACCTGAGTGACCTCATGCAGCTTCTGGAAATCGTAGAC 140446 Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTACAAACTGCCG 145652 | | |||| |||| | || || | || | || ||||| || || || || Sbjct 140445 ACCTTCGTTGTAATCCAC-GAACTGAGGAAGTGCCAAGGAGGCCAAGTTGCAGACGGCAA 140387 Query 145653 TCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTC 145712 ||| |||| | ||| | | ||| || | ||| | ||| | || || | Sbjct 140386 CCTCATCGGGAGCAGAGTACTCGATGATTTCAGTGCAGAGGTTGGAGCTGCGAATTGTGC 140327 Query 145713 CCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGC 145772 |||| || | ||| || || |||| |||||| ||||||||||||||| | || || Sbjct 140326 CCAGGTTCTTCTGGTTGCTCTTCCGGTTGCAATGATCCTTGTAGAGCATGAAGGGGTTGC 140267 Query 145773 CAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGCACGCACCTGCTG 145830 ||||||| ||| | ||| | ||| | || | | | ||| || ||| || Sbjct 140266 CAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAT--AGCTTCTGGGCCTTGACCGTCTT 140209 Query 145831 CTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCA 145890 | |||| |||| | ||||| ||| ||| || |||||||| | |||||||| Sbjct 140208 GCGTCCGCGGTCCTCCTTCTCGTACTTCTCGTATAGAGCCTCAAACTCTTCGCCGTAGCA 140149 Query 145891 ATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGAC 145950 |||| || ||||| |||| ||||| ||||| |||| ||| | ||||| | || Sbjct 140148 GTCGGCGAGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAAC 140089 Query 145951 GCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA-AT 146009 ||||| ||| || | ||| || | ||||| || | | |||||| || ||| | Sbjct 140088 GCGCTTCATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGC-ACGCACCT 140030 Query 146010 CCTCAGCACCCATGTTTCGCTTC---AAATTAAGCACACT-ATAGATGTCCGCGTGCCAC 146065 | || ||| ||| |||| | | || | ||| ||| || || ||||| Sbjct 140029 CTTCCTTACCGTGGTT---CTTCCGGAGGTCCAG-AAACTCGAAGACATCGGCATGCCAA 139974 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGT 146122 || |||| ||| | ||| | ||| || || ||||| |||||||| |||| | Sbjct 139973 GGCTCAAGATATATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACCTG 139914 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAG 146182 || | ||||| |||||||||| |||||| || |||| ||| ||||| || | Sbjct 139913 GCCGTATTGTTGAAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCG 139854 Query 146183 TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTAC 146242 || || |||| || || | || || | |||| ||| | |||||| | | Sbjct 139853 GCGATGTAGGAGCCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATC 139794 Query 146243 TTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTT 146299 ||||| || ||||| |||| |||||| ||||||||||| || ||||| || ||| Sbjct 139793 TTGGAGATCATGGCGCAAGTC-TTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTT 139735 Query 146300 CGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCC 146335 | ||| ||| ||| ||||| || | | ||| ||| Sbjct 139734 C--ATGTCGACCAGGAAGCAGGACGAGAGCTGGGCC 139701 >seq20 Length=161045 Score = 118 bits (130), Expect = 1e-21 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||||||||||||||| || | ||| || |||||| ||||||||||| || ||| Sbjct 65467 CCTTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGA 65526 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || ||||| || || ||||| ||| ||| ||||| | | Sbjct 65527 TCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 65586 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||||| | |||||||| |||| ||| | || ||||| || || || || |||| Sbjct 65587 CGATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGA 65646 Query 131225 AAATCTGCATGACTTATTTTATTCCTTCCTCTTAATAATCTT 131266 | ||||||| | |||| ||| || || ||||||||| Sbjct 65647 AGATCTGCACTATAAATTTGGATCCATCGTC--AATAATCTT 65686 >seq177 Length=70791 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||| || ||||| || ||| Sbjct 29389 CCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAG 29448 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| || |||||| ||||||||||| || ||| Sbjct 29449 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGG 29508 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 29509 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 29568 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 29569 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGA 29617 >seq32 Length=147543 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||| || || | || |||||| || || ||||| || Sbjct 71461 GCCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGA 71402 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| | ||||||||| ||| |||| | ||||||||| || || || Sbjct 71401 CAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGG 71342 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | || || | || || | Sbjct 71341 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCAC 71282 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || |||||||||||||| Sbjct 71281 CTCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | ||||||||||| || || |||||||| Sbjct 71005 GCCACCACGGAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATATTGTAATCCGA 70946 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| ||||||||||| ||| | || | ||||||||||| || || Sbjct 70945 GAGGGTACGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGCGG 70886 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || || ||| ||||| | || | ||||||| || || | Sbjct 70885 AATACCCTCCTTATCCTGAATCTTCGACTTGACATTATCGATGGTATCGGACGATTCCAC 70826 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || ||||| Sbjct 70825 CTCGAGGGTGATGGTCTTTCCGGT 70802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008056271360