Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq84 109 4e-19 seq177 96.9 2e-15 seq32 95.1 8e-15 >seq84 Length=107415 Score = 109 bits (120), Expect = 4e-19 Identities = 200/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 ||| | | |||||||||||| ||| |||| || ||||| | |||||||| || ||| Sbjct 71198 GACCCCTACTACCGCTACAAGATGGAGCGCCTCCAGACCAAGATTGAGGGTAAAGGCAAC 71257 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 ||||| || ||||| |||||||| || ||||| || | || | || || | | Sbjct 71258 GGTATCAAGACCGTTGTTGTCAACCTGAGCAGCGTCGCCCAGTCCCTTGCCCGTCCCGGC 71317 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | | ||||| ||||| | || ||||| || ||||| | | || | Sbjct 71318 TCCTATCTCATCAAATACTTCGGCTTTGAGCTTGGTGCCCAGACCAACATCGACCCTCCG 71377 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 | || |||| ||| | ||||| | || | | | |||||| ||||| | || ||| Sbjct 71378 GATGATCGCTGGATCATCAACGGCGCCCACGAGGCCGGCAAGCTCCAGGATCTTCTGGAC 71437 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| ||| ||||||| || || || | | ||| | |||||||||||||| Sbjct 71438 GGCTTCATTGGCAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCGGAGACCGA 71490 >seq177 Length=70791 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || || | ||| | || || ||||||||||| || || || || || || Sbjct 29388 ACCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGA 29447 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | || | || || | || || |||||||| |||||||| || || |||| || Sbjct 29448 GAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGG 29507 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267 || ||| || |||||| || || ||| ||||| | || || | ||| || || Sbjct 29508 GATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGAC--TCC 29565 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || || | || ||||| || ||||| | ||| |||||||| ||||||||| || Sbjct 29566 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGATT 29619 >seq32 Length=147543 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| |||||| || || ||||||||||| || |||||||| |||||| Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || || || || || || || || || || || ||||| | ||| Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| ||| || ||| || || | | || || | ||| || Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACC 71281 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||||| || || || || | || || ||||| |||||||| Sbjct 71280 TCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || ||| | ||||| || |||||||||||||| || || ||||| || | Sbjct 71234 TACCACCACGCAGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGG 71175 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| || |||| || || || || || || || || || || |||||||| | | Sbjct 71174 ACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCG 71115 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || |||||| || ||| || || || | | || || || | Sbjct 71114 GGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCA 71055 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || || || || || || |||| || || ||||| || |||||| Sbjct 71054 CCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943917936124