Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq84 109 4e-19
seq177 96.9 2e-15
seq32 95.1 8e-15
>seq84
Length=107415
Score = 109 bits (120), Expect = 4e-19
Identities = 200/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
||| | | |||||||||||| ||| |||| || ||||| | |||||||| || |||
Sbjct 71198 GACCCCTACTACCGCTACAAGATGGAGCGCCTCCAGACCAAGATTGAGGGTAAAGGCAAC 71257
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
||||| || ||||| |||||||| || ||||| || | || | || || | |
Sbjct 71258 GGTATCAAGACCGTTGTTGTCAACCTGAGCAGCGTCGCCCAGTCCCTTGCCCGTCCCGGC 71317
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | | ||||| ||||| | || ||||| || ||||| | | || |
Sbjct 71318 TCCTATCTCATCAAATACTTCGGCTTTGAGCTTGGTGCCCAGACCAACATCGACCCTCCG 71377
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
| || |||| ||| | ||||| | || | | | |||||| ||||| | || |||
Sbjct 71378 GATGATCGCTGGATCATCAACGGCGCCCACGAGGCCGGCAAGCTCCAGGATCTTCTGGAC 71437
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| ||| ||||||| || || || | | ||| | ||||||||||||||
Sbjct 71438 GGCTTCATTGGCAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCGGAGACCGA 71490
>seq177
Length=70791
Score = 96.9 bits (106), Expect = 2e-15
Identities = 163/234 (70%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || || | ||| | || || ||||||||||| || || || || || ||
Sbjct 29388 ACCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGA 29447
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| | || | || || | || || |||||||| |||||||| || || |||| ||
Sbjct 29448 GAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGG 29507
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267
|| ||| || |||||| || || ||| ||||| | || || | ||| || ||
Sbjct 29508 GATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCGCTCGAC--TCC 29565
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| || | || ||||| || ||||| | ||| |||||||| ||||||||| ||
Sbjct 29566 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGATT 29619
>seq32
Length=147543
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||| |||||| || || ||||||||||| || |||||||| ||||||
Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || || || || || || || || || || || || ||||| | |||
Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| ||| || ||| || || | | || || | ||| ||
Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACC 71281
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | ||||| || || || || | || || ||||| ||||||||
Sbjct 71280 TCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
Score = 82.4 bits (90), Expect = 5e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||| | ||||| || |||||||||||||| || || ||||| || |
Sbjct 71234 TACCACCACGCAGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGG 71175
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| || |||| || || || || || || || || || || |||||||| | |
Sbjct 71174 ACAGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCG 71115
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||| || |||||| || ||| || || || | | || || || |
Sbjct 71114 GGATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCA 71055
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || || || || || || || |||| || || ||||| || ||||||
Sbjct 71054 CCTCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATG 71005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943917936124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |