Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq12 125 9e-24 >seq12 Length=176190 Score = 125 bits (138), Expect = 9e-24 Identities = 388/598 (65%), Gaps = 8/598 (1%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || || || || |||| || ||||| | || |||||| |||| | || || || ||| Sbjct 140141 AGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTC 140082 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || ||||| || ||||| | ||| | || || || | | | || || || Sbjct 140081 ATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTA 140022 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| || || || ||| | | | ||| | |||||| || || | ||| Sbjct 140021 CCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATAT 139962 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | || || || ||||| || ||||| || | ||| || || || || || Sbjct 139961 ATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTG 139902 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | || ||| ||||| || || ||||| ||||| || || || | ||| ||| Sbjct 139901 AAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAG 139842 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 || ||||||| || || || || || || || ||||| || ||||| | Sbjct 139841 CCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATG 139782 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439 ||||| || | ||| || ||||||||||| || || |||||| |||||| | || Sbjct 139781 GCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGG 139722 Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499 || ||| || | ||| | || || || || || | ||| || |||||||| Sbjct 139721 AAGCAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGT 139662 Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCA 63555 || || | || || | || ||||| |||||||| || || | | || || Sbjct 139661 GTGAAGAACTTGCTCGACATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCC 139602 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 |||| || || || || ||||| | ||||||||| || | || ||||||||| Sbjct 139601 CAGATG----CCGACGGCAACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTG 139548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625631998400