Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 9e-24
>seq12
Length=176190
Score = 125 bits (138), Expect = 9e-24
Identities = 388/598 (65%), Gaps = 8/598 (1%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || |||| || ||||| | || |||||| |||| | || || || |||
Sbjct 140141 AGACCGGGGCACTCATTGGGGCACATGAGCGTCCACTCCCCGTTCTTCTCAACGCGCTTC 140082
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| || ||||| || ||||| | ||| | || || || | | | || || ||
Sbjct 140081 ATGAAAAGATCCGGGATCCACAAAGCAAGGAAGAGGTCGCGAGCACGCACCTCTTCCTTA 140022
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| || || || ||| | | | ||| | |||||| || || | |||
Sbjct 140021 CCGTGGTTCTTCCGGAGGTCCAGAAACTCGAAGACATCGGCATGCCAAGGCTCAAGATAT 139962
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | || || || ||||| || ||||| || | ||| || || || || ||
Sbjct 139961 ATGGCAAAGGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTATTGTTG 139902
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | || ||| ||||| || || ||||| ||||| || || || | ||| |||
Sbjct 139901 AAGACGCGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTTGTGCCGGCGATGTAGGAG 139842
Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379
|| ||||||| || || || || || || || ||||| || ||||| |
Sbjct 139841 CCGGTGGCACGGATGCGGTGGATGTTCAGGCCAATGCCGCCGGCCATCTTGGAGATCATG 139782
Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439
||||| || | ||| || ||||||||||| || || |||||| |||||| | ||
Sbjct 139781 GCGCAAGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGG 139722
Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499
|| ||| || | ||| | || || || || || | ||| || ||||||||
Sbjct 139721 AAGCAGGACGAGAGCTGGGCCTGGGGTGTACCGGCGTTGAAGAGGGTCGGCGAAGCGTGT 139662
Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCA 63555
|| || | || || | || ||||| |||||||| || || | | || ||
Sbjct 139661 GTGAAGAACTTGCTCGACATGAGGTTGTATGTCTCAATGACTCGCTCGACGTTGTCTCCC 139602
Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613
|||| || || || || ||||| | ||||||||| || | || |||||||||
Sbjct 139601 CAGATG----CCGACGGCAACGCGCATGATCATGTGCTGTGGACGCTCGACGATCTTG 139548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633625631998400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |