Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq364 111 3e-19
seq320 91.5 3e-13
seq16 86.0 1e-11
>seq364
Length=35427
Score = 111 bits (122), Expect = 3e-19
Identities = 109/138 (79%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| |||||||| ||||| || ||| ||||| |||| ||| ||
Sbjct 12749 CTCACTCGCGCATGCGCGGTCTCTCTGGTGGTCAGCGTGTCAAGGTTGTGCTCGCCGCTT 12808
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||||| |||||| ||||||| ||||||||||||||||||||||| |||||
Sbjct 12809 GCTC-GTGGCAACGTCCTCACCTGATCGTCCTCGACGAGCCTACCAACTATCTCGACCGT 12867
Query 280821 GAGAGCCTGGGCGCTCTG 280838
|| || || ||||||
Sbjct 12868 GACTCGCTTGGTGCTCTG 12885
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232
||||| || ||||| ||||| || |||||||| || ||||| ||||| ||||||||| |
Sbjct 12175 GTCATCGGCCCCAACGGTGCTGGCAAGTCTACACTCATCAACGTCCTTACTGGCGAGCTC 12234
Query 280233 CAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
|||||| || | | ||||| ||||| || || || ||| || ||
Sbjct 12235 ATCCCCACTGGCGGCGAGATCTACCAGCATGAGAACATTCGTATTGCCTACATCAAGCAA 12294
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
|| || ||| || ||||| |||||||||||| ||| || | | ||||||||||||
Sbjct 12295 CATGCCTTCGCTCATATCGATAACCACCTGGACTCGACCCCATCCGAGTACATTCAGTGG 12354
Query 280353 CG 280354
||
Sbjct 12355 CG 12356
Score = 87.8 bits (96), Expect = 4e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| ||||| || || |||| ||||||||||| || |||| |||||||| || |||
Sbjct 11347 GGCGAGGACCTCTGCAACTGCACCTTCTCGCTCGCCTACGGTGCCAAGATTCTCCTCAAC 11406
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| |||| ||||||||||| | || || ||||| ||| ||||| || |
Sbjct 11407 CAGACCAGCCTGCGTCTCAAGCGTGGCCAACGCTACGGTCTGTGCGGCCCCAACGGTTCC 11466
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||||| ||||| ||||| |||| ||| | || || || ||||| |||
Sbjct 11467 GGCAAGTCTACTCTGATGCGTGCCATCAACAACGAGCAGGTCGAGGGCTTCCCTAA-GCA 11525
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| || | ||| || | || ||||||||| | |||||
Sbjct 11526 GAGCGAAGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 11567
>seq320
Length=41428
Score = 91.5 bits (100), Expect = 3e-13
Identities = 205/306 (67%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTATGATGTGGAGCGTTCTAT 218573
|||||| || ||||||||||||| || ||| | || | | | | ||| |||||
Sbjct 24947 GACTTCGTCCACAAGGAGCTCATCCTCTTCAGCATGGCCG-ACAACAT---GCGGTCTAT 25002
Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633
||| | |||| || ||||| ||||| ||||| ||| || ||| || || |||||
Sbjct 25003 TCCGTCCATGGTTGACGGCCTGAAGCCCGGTCAGCGCAAGGTCATCTATGGTGCCTTCAA 25062
Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693
||||||||| || || ||||| || ||||| | ||||| || ||||| | |
Sbjct 25063 GCGGAACCTCGTCAGCGACCAAAAGGTTGCCGAGTTTGCCGGTTACGTCTCCGAGGTGGC 25122
Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753
| ||||| ||||| ||| | |||||| | || | ||| | || ||| ||||
Sbjct 25123 CGCATACCACCACGGGGAGGCGTCGCTGCAGCAGACAATCATTGGCCTAGCGCAGAACTA 25182
Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813
|| || ||| ||| | |||| ||| || | ||| | |||||||| ||||| |
Sbjct 25183 CGTTGGATCTAATAACGTCAACTGCCTGGAGCCTAGCGGCAACTTTGGTTCGCGTCTGTC 25242
Query 218814 GGGTGG 218819
|||||
Sbjct 25243 TGGTGG 25248
>seq16
Length=164739
Score = 86.0 bits (94), Expect = 1e-11
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
|||| || ||||| || || || ||||| || || ||||| | ||||| |||||| |
Sbjct 125097 TCATCGGCCCCAACGGCGCCGGCAAGTCGACGCTGATCAAGCTTCTGACGGGCGAGGTCA 125038
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
| || | || || |||||||||||| | ||||| | ||| || ||||
Sbjct 125037 TCCCGACAGCCGGCAAGGTCGAGAAGCATCCCAATCTCCGGATCGGATACATCAAGCAGC 124978
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| || | ||| |||||| ||||| || | ||| || ||||||||| |||| ||||
Sbjct 124977 ACGCGCTCGAGCACGTCGAGATGCACCTCGAGAAGACGCCCAACCAATACCTTCAATGGC 124918
Query 280354 GCTATGC 280360
| || ||
Sbjct 124917 GGTACGC 124911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027826211996164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |