Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09]
804 sequences; 36,704,944 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq177 170 4e-37
seq32 158 2e-33
seq20 132 9e-26
seq364 98.7 2e-15
seq320 96.9 6e-15
>seq177
Length=70791
Score = 170 bits (188), Expect = 4e-37
Identities = 178/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || ||| ||| || ||||||||||| ||||||
Sbjct 29389 CCACCACGCAGGCGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAGTCGGAG 29448
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| ||||| || | |||||| ||||| || || || | || |||||||| ||
Sbjct 29449 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATTAGGCGCTGCTGGTCGGGCGGG 29508
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||| | |||||| ||||||||||| ||| || || ||
Sbjct 29509 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 29567
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464
|| | |||||| || || |||||||||||||| ||||| |||||||| ||
Sbjct 29568 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGAT 29618
>seq32
Length=147543
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || ||| ||| || |||||||| || |||||
Sbjct 71232 CCACCACGCAGACGGAGAACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 71173
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || || || |||||||| || ||||| ||||| | ||||| || || ||
Sbjct 71172 AGGGTCCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGTTGATCAGGCGGG 71113
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||||| |||||| || |||||||| | || || ||
Sbjct 71112 ATGCCCTCCTTGTCCTGGATCTTTGATTTGACGTTGTCAATGGTGTCCGAGGACTCCACC 71053
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || || || ||||||||||| || |||||
Sbjct 71052 TCCAACGTGATCGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 71006
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| || ||| ||| || ||||| || || || ||
Sbjct 71460 CCACCACGGAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCAGAC 71401
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| ||||| || |||||||| || ||||| ||||| | || || || || ||
Sbjct 71400 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATGAGACGCTGCTGATCAGGCGGG 71341
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | ||||||| || || ||||| | ||||| ||
Sbjct 71340 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATTGTGTCCGAAGATTCCACC 71281
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || ||||| ||||| ||||||||||| ||||||||
Sbjct 71280 TCGAGCGTAATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 71234
>seq20
Length=161045
Score = 132 bits (146), Expect = 9e-26
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||| ||||| || || ||||| || | || || || | |||||| ||||| || ||
Sbjct 65469 TTTTGAATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATC 65528
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || || ||||| |||||||| || ||||| | |||||| |||
Sbjct 65529 AGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 65588
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
||||| || | || || || || | |||||| || || |||||||||||||| |||||
Sbjct 65589 ATGGTATCCGAGGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTCACGAAG 65648
Query 68454 ATCTGCATTAT 68464
||||||| |||
Sbjct 65649 ATCTGCACTAT 65659
>seq364
Length=35427
Score = 98.7 bits (108), Expect = 2e-15
Identities = 133/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||| ||||||| | |||||| |||||||||||| || ||||| ||| |||
Sbjct 12356 CGCCACTGAATGTACTCGGATGGGGTCGAGTCCAGGTGGTTATCGATATGAGCGAAGGCA 12297
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099
|| || | ||| || || || ||||| ||||| | | ||| | ||| ||
Sbjct 12296 TGTTGCTTGATGTAGGCAATACGAATGTTCTCATGCTGGTAGATCTCGCCGCCAGTGGGG 12237
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | |||||| || ||||| |||||||| |||| |||||| ||||| |||||||| ||
Sbjct 12236 ATGAG-CTCGCCAGTAAGGACGTTGATGAGTGTAGACTTGCCAGCACCGTTGGGGCCGAT 12178
Query 225160 CAC 225162
||
Sbjct 12177 GAC 12175
Score = 89.7 bits (98), Expect = 9e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225818 GGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCG 225877
||||||||||| | ||| | || || ||||| | ||| ||| |||||| | |||
Sbjct 11519 GGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATCAGAGTAGACTTGCCGGAACCG 11460
Query 225878 TTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGG 225937
||||| ||| || ||||| | | || ||||||| |||| || ||| |||
Sbjct 11459 TTGGGGCCGCACAGACCGTAGCGTTGGCCACGCTTGAGACGCAGGCTGGTCTGGTTGAGG 11400
Query 225938 AGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|| |||||| |||| ||||| || ||||| ||| | ||| |||||||| ||||||||
Sbjct 11399 AGAATCTTGGCACCGTAGGCGAGCGAGAAGGTGCAGTTGCAGAGGTCCTCGCCCTCCTC 11341
>seq320
Length=41428
Score = 96.9 bits (106), Expect = 6e-15
Identities = 111/148 (75%), Gaps = 5/148 (3%)
Strand=Plus/Minus
Query 178044 AAGATGTTGGTGAGCTTTGAACCGTATCCATTCCTGCCTGCGCCAGTCCTCTCCTGGGCA 178103
|||||||||| |||||| | ||||| || || | ||| || | ||||||| || ||||
Sbjct 23373 AAGATGTTGGCGAGCTTCGCGCCGTAACCGTTGCGGCCACCGACGGTCCTCTTCTCGGCA 23314
Query 178104 TCATCAAAGTTCTCGCCCGTGAGGAGGTGGCCGAAGATGAGCTCGGGCACATAGCA---- 178159
|| || |||| ||||||||| || || || |||||||||||||| | |||||
Sbjct 23313 TCGTCGTAGTTGGAGCCCGTGAGAAGATGACCAAAGATGAGCTCGGGGATGTAGCACTTT 23254
Query 178160 TCCTTCTTCGTGTTTCTCCACTGGGATG 178187
||||| |||||| |||| | ||||||
Sbjct 23253 TCCTT-TTCGTGCATCTCGATCGGGATG 23227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921613137694880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |